Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP24 ENSTTRG00000017010 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 24 (membrane-inserted)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016127, Bottlenosed dolphin)

Protein Percentage 96.83%
cDNA percentage 96.9%
Ka/Ks Ratio 0.26106 (Ka = 0.0212, Ks = 0.0812)

MMP24 ENSBTAG00000010024 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013222, Cow)

Protein Percentage 96.16%
cDNA percentage 92.9%
Ka/Ks Ratio 0.0675 (Ka = 0.0234, Ks = 0.347)

MMP24  (Minke Whale)

Gene Details

matrix metallopeptidase 24 (membrane-inserted)

External Links

Gene match (Identifier: BACU015536, Minke Whale)

Protein Percentage 97.22%
cDNA percentage 97.28%
Ka/Ks Ratio 0.24581 (Ka = 0.0181, Ks = 0.0738)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1614 bp    Location:3342964..3372254   Strand:+
>bmy_00581
ATGAAAGAGAACTGGTTAAAGTCATACGGCTATCTGCTGCCCTATGACTCACGGGCATCTGCGTTGCACTCAGGGAAGGCCTTACAGTCAGCAGTCGCCACTATGCAGCAGTTTTACGGGATCCCAGTCACCGGTGTGTTGGATCAGACAACAATCGAGTGGATGAAGAAACCCCGATGTGGTGTCCCTGATCACCCGCACTTGAGCCGAAGGCGGAGAAACAAGCGCTATGCCCTGACGGGACAGAAGTGGCGGCAGAAGCACATCACCTACAGCATTCACAACTACACCCCAAAGGTGGGTGAGTTAGACACGCGGAAAGCTATTCGACAGGCTTTCGATGTGTGGCAGAAGGTGACCCCGCTGACCTTTGAAGAGGTGCCCTACCATGAAATCAAAAGTGACCGGAAGGAGGCCGACATCATGATCTTCTTTGCTTCTGGCTTCCATGGCGACAGCTCCCCGTTTGATGGTGAAGGGGGATTCCTGGCTCATGCCTACTTCCCTGGCCCAGGGATTGGTGGAGACACTCACTTTGATTCAGACGAGCCATGGACATTAGGAAATGCCAACCACGATGGGAATGACCTCTTCCTGGTGGCCGTGCATGAGCTGGGCCACGCGCTGGGACTGGAGCACTCCAACGACCCCAGCGCCATCATGGCACCCTTCTACCAGTACATGGAAACACACAACTTCAAGCTGCCTCAGGATGATCTCCAGGGCATCCAGAAGATCTACGGACCCCCCGCGGAGCCCCTGGAGCCCACAAGGCCCCTCCCCACACTCCCCGTCCGCAGGATCCACTCACCGTCTGAGAGGAAGCATGAGCGCCAGCCCAGGCCCCCTCGGCCGCCCCTGGGGGACCAGCCAGCCACACCGGGCGCCAAACCCAACATCTGTGACGGCAACTTCAACACGGTGGCCCTCTTCCGGGGCGAGATGTTTGTGTTTAAGAGGGTGGTGCAGACAACTGAAGACCATCCAGTGCTCCATGGAAAGCCACCCTGTGACAAGTACTGGGTGTTTAAGGAGGTGACGGTGGAGCCTGGGTACCCCCACAGCCTGGGGGAGCTGGGCAGCTGTCTGCCCCGAGAAGGCATTGACACAGCTCTGCGCTGGGAACCTGTGGGCAAGACCTACTTTTTCAAAGGCGAGCGGTACTGGCGCTACAGCGAGGAGCGGCGGGCCACGGACCCTGGCTATCCCAAGCCCATCACCGTGTGGAAGGGCATCCCCCAGGCTCCCCAAGGGGCCTTCATCAGCAAGGAAGGATATTACACCTACTTCTACAAGGGCCGGGACTACTGGAAATTCGACAACCAGAAACTAAGCGTGGAGCCAGGCTACCCGCGCAACATCCTGCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGGAGAGGCGCAAGGAGCGGCGGCTGCCCCAGGACGATGTGGACATCATGGTGACCATCAACGACGTGCCAGGCTCTGTGAATGCAGTGGCCGTGGTCATCCCCTGCATCCTGTCCCTCTGCATCCTGGTGCTGGTCTACACCATCTTCCAGTTCAAGAACAAGGCAGGCCCTCAGCCTGTCACCTACTATAAGCGGCCAGTCCAGGAGTGGGTGTGA

Related Sequences

bmy_00581T0 Protein

Length: 538 aa      View alignments
>bmy_00581T0
MKENWLKSYGYLLPYDSRASALHSGKALQSAVATMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDQPATPGAKPNICDGNFNTVALFRGEMFVFKRVVQTTEDHPVLHGKPPCDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKAGPQPVTYYKRPVQEWV*