KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:30 2014 Check: 00 .. Name: bmy_00581T0/1-537 Len: 646 Check: 8194 Weight: 1.00 Name: ENSP00000246186/1-645 Len: 646 Check: 579 Weight: 1.00 Name: ENSBTAP00000013222/1-585 Len: 646 Check: 7791 Weight: 1.00 Name: BACU015536/1-532 Len: 646 Check: 3655 Weight: 1.00 Name: ENSTTRP00000016127/1-571 Len: 646 Check: 5831 Weight: 1.00 // 1 50 bmy_00581T0/1-537 ---------- ---------- ---------- ---------- ---------- ENSP00000246186/1-645 MPRSRGGRAA PGPPPPPPPP GQAPRWSRWR VPGRLLLLLL PALCCLPGAA ENSBTAP00000013222/1-585 ---------- LAPHPHPSIS SNIPR----- ---------- ---------- BACU015536/1-532 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016127/1-571 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_00581T0/1-537 ---------- ---------- ---------- MKENWLKSYG YLLPYDSRAS ENSP00000246186/1-645 RAAAAAAGAG NRAAVAVAVA RADEAEAP-F AGQNWLKSYG YLLPYDSRAS ENSBTAP00000013222/1-585 ---------- TTLSITGDLG NTEEGESTGL GSENWLKSYG YLLPYDSRSS BACU015536/1-532 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016127/1-571 ---------- ---------- -----ELATL AGQNWLKSYG YLLPYDSRAS 101 150 bmy_00581T0/1-537 ALHSGKALQS AVATMQQFYG IPVTGVLDQT TIEWMKKPRC GVPDHPHLSR ENSP00000246186/1-645 ALHSAKALQS AVSTMQQFYG IPVTGVLDQT TIEWMKKPRC GVPDHPHLSR ENSBTAP00000013222/1-585 ALHSGKALQS AVATMQQFYG IPVTGVLDQT TIEWMKKPRC GVPDHPHLSR BACU015536/1-532 ---------- ----MQQFYG IPVTGVLDQT TIEWMKKPRC GVPDHPHLSR ENSTTRP00000016127/1-571 ALHSGKALQS AVATMQQFYG IPVTGVLDQT TIEWMKKPRC GVPDHPHLSR 151 200 bmy_00581T0/1-537 RRRNKRYALT GQKWRQKHIT YSIHNYTPKV GELDTRKAIR QAFDVWQKVT ENSP00000246186/1-645 RRRNKRYALT GQKWRQKHIT YSIHNYTPKV GELDTRKAIR QAFDVWQKVT ENSBTAP00000013222/1-585 RRRHKRYALT GQKWRQKHIT YSIHNYTPKV GELDTRKAIR QAFDVWQKVT BACU015536/1-532 RRRNKRYALT GQKWRQKHIT YSIHNYTPKV GELDTRKAIR QAFDVWQKVT ENSTTRP00000016127/1-571 RRRNKRYALT GQKWRQKHIT YSIHNYTPKV GELDTRKAIR QAFDVWQKVT 201 250 bmy_00581T0/1-537 PLTFEEVPYH EIKSDRKEAD IMIFFASGFH GDSSPFDGEG GFLAHAYFPG ENSP00000246186/1-645 PLTFEEVPYH EIKSDRKEAD IMIFFASGFH GDSSPFDGEG GFLAHAYFPG ENSBTAP00000013222/1-585 PLTFEEVPYH EIKSDRKEAD IMIFFASGFH GDSSPFDGEG GFLAHAYFPG BACU015536/1-532 PLTFEEVPYH EIKSDRKEAD IMIFFASGFH GDSSPFDGEG GFLAHAYFPG ENSTTRP00000016127/1-571 PLTFEEVPYH EIKSDRKEAD IMIFFASGFH GDSSPFDGEG GFLAHAYFPG 251 300 bmy_00581T0/1-537 PGIGGDTHFD SDEPWTLGNA NHDGNDLFLV AVHELGHALG LEHSNDPSAI ENSP00000246186/1-645 PGIGGDTHFD SDEPWTLGNA NHDGNDLFLV AVHELGHALG LEHSSDPSAI ENSBTAP00000013222/1-585 PGIGGDTHFD SDEPWTLGNA NHDGNDLFLV AVHELGHALG LEHSNDPSAI BACU015536/1-532 PGIGGDTHFD SDEPWTLGNA NHDGNDLFLV AVHELGHALG LEHSNDPSAI ENSTTRP00000016127/1-571 PGIGGDTHFD SDEPWTLGNA NHDGNDLFLV AVHELGHALG LEHSNDPSAI 301 350 bmy_00581T0/1-537 MAPFYQYMET HNFKLPQDDL QGIQKIYGPP AEPLEPTRPL PTLPVRRIHS ENSP00000246186/1-645 MAPFYQYMET HNFKLPQDDL QGIQKIYGPP AEPLEPTRPL PTLPVRRIHS ENSBTAP00000013222/1-585 MAPFYQYMET HNFKLPQDDL QGIQKIYG-- ---------- ----VWRIHS BACU015536/1-532 MAPFYQYMET HNFKLPQDDL QGIQKIYGPP AEPLEPTRPL PTLPVRRIHS ENSTTRP00000016127/1-571 MAPFYQYMET HNFKLPQDDL QGIQKIYGPP AEPLEPTRPL PTLPVRRIHS 351 400 bmy_00581T0/1-537 PSERKHERQP RPPRPPLGDQ PATPGAKPNI CDGNFNTVAL FRGEMFVFK- ENSP00000246186/1-645 PSERKHERQP RPPRPPLGDR PSTPGTKPNI CDGNFNTVAL FRGEMFVFKD ENSBTAP00000013222/1-585 PSERKHERQP RPPRPPLGDR PATPGAKPNI CDGNFNTVAL FRGEMFVFKD BACU015536/1-532 PSERKHERQP RPPRPPLGDR PATPGAKPNI CDGNFNTVAL FRGEMFVFKD ENSTTRP00000016127/1-571 PSERKHERQP RPPRPPLGDR PATPGAKPNI CDGNFNTVAL FRGEMFVFKD 401 450 bmy_00581T0/1-537 ------RVVQ TTEDHPVLH- ----GKPP-- ---------- -----CDKYW ENSP00000246186/1-645 RWFWRLRNNR VQEGYPMQIE QFWKGLPARI DAAYERADGR FVFFKGDKYW ENSBTAP00000013222/1-585 RWFWRLRNNR VQEGYPMQIE QFWKGLPARI DAAYERADGR FVFFKGDKYW BACU015536/1-532 RWFWRLRNNR VQEGYPMQIE QFWKGLPARI DAAYERADGR FVFFKGDKYW ENSTTRP00000016127/1-571 RWFWRLRNNR VQEGYPMQIE QFWKGLPARI DAAYERADGR FVFFKGDKYW 451 500 bmy_00581T0/1-537 VFKEVTVEPG YPHSLGELGS CLPREGIDTA LRWEPVGKTY FFKGERYWRY ENSP00000246186/1-645 VFKEVTVEPG YPHSLGELGS CLPREGIDTA LRWEPVGKTY FFKGERYWRY ENSBTAP00000013222/1-585 VFKEVTVEPG YPHSLGELGS CLPREGIDTA LRWEPVGKTY FFKGERYWRY BACU015536/1-532 VFKEVTVEPG YPHSLGELGS CLPREGIDTA LRWEPVGKTY FFKGERYWRY ENSTTRP00000016127/1-571 VFKEVTVEPG YPHSLGELGS CLPREGIDTA LRWEPVGKTY FFKGERYWRY 501 550 bmy_00581T0/1-537 SEERRATDPG YPKPITVWKG IPQAPQGAFI SKEGYYTYFY KGRDYWKFDN ENSP00000246186/1-645 SEERRATDPG YPKPITVWKG IPQAPQGAFI SKEGYYTYFY KGRDYWKFDN ENSBTAP00000013222/1-585 SEERRATDPG YPKPITVWKG IPQAPQGAFI SKEGYYTYFY KGRDYWKFDN BACU015536/1-532 SEERRATDPG YPKPITVWKG IPQAPQGAFI SKEGYYTYFY KGRDYWKFDN ENSTTRP00000016127/1-571 SEERRATDPG YPKPITVWKG IPQAPQGAFI SKEGYYTYFY KGRDYWKFDN 551 600 bmy_00581T0/1-537 QKLSVEPGYP RNILRDWMGC NQKEVERRKE RRLPQDDVDI MVTINDVPGS ENSP00000246186/1-645 QKLSVEPGYP RNILRDWMGC NQKEVERRKE RRLPQDDVDI MVTINDVPGS ENSBTAP00000013222/1-585 QKLSVEPGYP RNILRDWMGC NQKEAERRKE RRLPQDDVDI MVTINDVPGS BACU015536/1-532 QKLSVEPGYP RNILRDWMGC NQKEVERRKE RRLPQDDVDI MVTINDVPGS ENSTTRP00000016127/1-571 QKLSVEPGYP RNILRDWMGC NQKEVERRKE RRLPQDDVDI MVTINDVPGS 601 650 bmy_00581T0/1-537 VNAVAVVIPC ILSLCILVLV YTIFQFKNKA GPQPVTYYKR PVQEWV ENSP00000246186/1-645 VNAVAVVIPC ILSLCILVLV YTIFQFKNKT GPQPVTYYKR PVQEWV ENSBTAP00000013222/1-585 VNAVAVVIPC ILSLCILVLV YTIFQFKNKA GPQPVTYYKR PVQEWV BACU015536/1-532 VNAVAVVIPC ILSLCILVLV YTIFQFKNKA GPQPVTYYKR PVQEWV ENSTTRP00000016127/1-571 VNAVAVVIPC ILSLCILVLV YTIFQFKNKA GPQPVTYYKR PVQEWV