Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EDEM2 ENSTTRG00000017007 (Bottlenosed dolphin)

Gene Details

ER degradation enhancer, mannosidase alpha-like 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016124, Bottlenosed dolphin)

Protein Percentage 98.89%
cDNA percentage 98.71%
Ka/Ks Ratio 0.15234 (Ka = 0.0053, Ks = 0.0345)

EDEM2 ENSBTAG00000003815 (Cow)

Gene Details

ER degradation-enhancing alpha-mannosidase-like 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004969, Cow)

Protein Percentage 97.4%
cDNA percentage 95.21%
Ka/Ks Ratio 0.08647 (Ka = 0.0139, Ks = 0.1607)

EDEM2  (Minke Whale)

Gene Details

ER degradation enhancer, mannosidase alpha-like 2

External Links

Gene match (Identifier: BACU015538, Minke Whale)

Protein Percentage 90.52%
cDNA percentage 91.61%
Ka/Ks Ratio 0.40952 (Ka = 0.0321, Ks = 0.0784)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1791 bp    Location:3262509..3232334   Strand:-
>bmy_00579
ATGCCTTTCCGGCTGCTCGTCCCGTTTGGCCTCCTGTGTGCGCTGCTGCCCCTGCACCATGGTGCGCCCGGCCCGGATGGCACCGCGCCCGACCCCGCCCACTACAGACCCCCCACCCTGACCTGCTCGGACCCCGCCACTGGGCTCCTCGCAGAAATCAGGGAGCGAGTCAAGGCCATGTTCTACCACGCCTACGACAGCTACCTGGAGAATGCCTTTCCCTACGACGAGCTGCGACCTCTCACCTGTGACGGGCACGACACCTGGGGCAGTTTTTCTCTGACTCTTATTGATGCTCTGGACACCTTGTTGATTTTAGGGAATGTCTCAGAATTCCAAAGAGTGGTTGAAGTGCTCCAGGACAACGTGGACTTTGATATTGATGTGAACGCCTCTGTGTTTGAAACCAACATCCGAGTGGTAGGAGGACTTCTGTCTGCTCACCTGCTATCAAAGAGGGCTGGGGTAGAAGTGGAGGCTGGATGGCCCTGCTCGGGACCTCTCCTGAGGATGGCTGAGGAGGCAGCCCGGAAACTCCTCCCAGCCTTTCAGACCCCCACTGGCATGCCGTATGGAACGGTGAACCTGCTTCACGGCGTGAACCTGGGAGAGACTCCTGTCACCTGCACAGCAGGGATCGGGACCTTCATCGTGGAATTTGCCACCCTGAGCAGCCTCACCGGTGACCCTGTGTTCGAAGACGTGGCCAGAGTGGCCCTGATGCGCCTCTGGGAGAGCCGGTCAGATATTGGGCTGGTCGGCAACCACATCGACGTGCTCACTGGCAAGTGGGTGGCCCAGGACGCAGGCATCGGGGCTGGCGTGGACTCCTACTTTGAGTACCTGGTAAAAGGAGCCATCCTGCTTCAGGATAAGAAGCTCATGGCCATGTTCCTAGAATATAACAAAGCCATTCGGAATTACACCCGCTTCGATGACTGGTACCTGTGGGTGCAGATGTACAAGGGGACTGTGTCCATGCCAGTCTTCCAGTCTCTGGAGGCCTACTGGCCTGGTCTTCAGACCCTCATTGGGGACATTGACAATGCCATGAGGACCTTCCTCAACTACTACACCGTCTGGAAGCAGTTTGGGGGGCTCCCGGAATTCTACAACATTCCTCAGGGATATACAGTGGAGAAGCGAGAGGGTTACCCGCTTCGACCAGAACTCATTGAGAGCGCCATGTACCTCTACCGTGCCACGGGGGACCCCACCCTCTTAGAACTCGGAAGAGACGCCGTGGAATCCATCGAAAAAATCAGCAAGGTGGAATGTGGATTTGCCACAATCAAAGATCTGCGAGACCACAAGCTTGACAACCGCATGGAGTCTTTCTTCCTGGCCGAGACCGTGAAATACCTCTACCTGCTGTTTGACCCGACCAACTTCATCCACAACAATGGCTCCACCTTCGATGTGGTGATAACCCCCTACGGGGAGTGCATCCTGGGGGCCGGGGGTTACATCTTCAACACAGAAGCACACCCCATCGACCCCGCCGCCCTGCACTGTTGCCGGAGGCTGAAGGAAGAGCAGTGGGAAGTGGAAGATCTGATGAGGGAATTCTACTCTCTCAAACGGAATAGGTCGAGATTTCAGAAAAAAACTATGAGCTCAGGGCCATGGGAACCCCCAGCAGGGCCAGGAACAATGTCCTCCCCTGAAAACTATGACCGGGCAAGGGAGAAGAAGCCCGCCAAGCAGAAAATCCCACTTCTCAGCTGCCCTAGTCAGCCCTTTACCTCAAAGTTGGCATTACTGGGACAGGTTTTCCTAGATTCCTCATAA

Related Sequences

bmy_00579T0 Protein

Length: 597 aa      View alignments
>bmy_00579T0
MPFRLLVPFGLLCALLPLHHGAPGPDGTAPDPAHYRPPTLTCSDPATGLLAEIRERVKAMFYHAYDSYLENAFPYDELRPLTCDGHDTWGSFSLTLIDALDTLLILGNVSEFQRVVEVLQDNVDFDIDVNASVFETNIRVVGGLLSAHLLSKRAGVEVEAGWPCSGPLLRMAEEAARKLLPAFQTPTGMPYGTVNLLHGVNLGETPVTCTAGIGTFIVEFATLSSLTGDPVFEDVARVALMRLWESRSDIGLVGNHIDVLTGKWVAQDAGIGAGVDSYFEYLVKGAILLQDKKLMAMFLEYNKAIRNYTRFDDWYLWVQMYKGTVSMPVFQSLEAYWPGLQTLIGDIDNAMRTFLNYYTVWKQFGGLPEFYNIPQGYTVEKREGYPLRPELIESAMYLYRATGDPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTNFIHNNGSTFDVVITPYGECILGAGGYIFNTEAHPIDPAALHCCRRLKEEQWEVEDLMREFYSLKRNRSRFQKKTMSSGPWEPPAGPGTMSSPENYDRAREKKPAKQKIPLLSCPSQPFTSKLALLGQVFLDSS*