Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ASIP ENSTTRG00000003631 (Bottlenosed dolphin)

Gene Details

agouti signaling protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003406, Bottlenosed dolphin)

Protein Percentage 87.12%
cDNA percentage 90.4%
Ka/Ks Ratio 0.32915 (Ka = 0.0756, Ks = 0.2298)

ASIP ENSBTAG00000034077 (Cow)

Gene Details

Agouti-signaling protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045382, Cow)

Protein Percentage 82.71%
cDNA percentage 86.97%
Ka/Ks Ratio 0.35618 (Ka = 0.1104, Ks = 0.31)

ASIP  (Minke Whale)

Gene Details

agouti signaling protein

External Links

Gene match (Identifier: BACU015549, Minke Whale)

Protein Percentage 61.08%
cDNA percentage 69.66%
Ka/Ks Ratio 0.78066 (Ka = 0.3764, Ks = 0.4822)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 525 bp    Location:2476697..2479593   Strand:+
>bmy_00563
ATGGATGTCACCCGCCTCCTCCTGGCTACCCTGCTGGTCTGCCTGTGCTCCCTCACTGCCTACAGCCACCTGGCACCTGAGGAAAAGCCCAGAGATGAAAGGAGCCTGAGGAGCAACTCTTCCATGAACCTGTTGGATTTCCCTTCTGTCTCTATTGTGGCTCAGGGCCCTCAGAGACTGGCTTTGCTCCTTCTCTCCTTGAAGCACAGAACAAGAAATCCAAAAAGATCAGCAGAAAAGAAGCGGAAAAAAAGAAAAGATCTTCCAAGTCCAAGGAGTTCCCAGGCAGAGGTGAGGATCAGTGGGGCGGACGTGGACTGCTCGGGCAGCCCCGGCGTTTCCCCGCAGAAAAAGGATTCGATGAAGAAGGTGGCACGGCCCCGGCCCCCGCCGCCTGGCCCCTGCGTGGCCACCCGCGACAGCTGCAAGCCGCCGGCGCCTGCCTGCTGCGACCCGTGCGCCTTCTGCCAGTGCCGCTTCTTCCGCAGCGCCTGTTCCTGCCGCGTGCTCAGCCCCACCTGCTGA

Related Sequences

bmy_00563T0 Protein

Length: 175 aa      View alignments
>bmy_00563T0
MDVTRLLLATLLVCLCSLTAYSHLAPEEKPRDERSLRSNSSMNLLDFPSVSIVAQGPQRLALLLLSLKHRTRNPKRSAEKKRKKRKDLPSPRSSQAEVRISGADVDCSGSPGVSPQKKDSMKKVARPRPPPPGPCVATRDSCKPPAPACCDPCAFCQCRFFRSACSCRVLSPTC*