KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:53 2014 Check: 00 .. Name: BACU015549/1-171 Len: 189 Check: 9779 Weight: 1.00 Name: ENSP00000454804/1-132 Len: 189 Check: 5290 Weight: 1.00 Name: bmy_00563T0/1-174 Len: 189 Check: 8940 Weight: 1.00 Name: ENSTTRP00000003406/1-132 Len: 189 Check: 3162 Weight: 1.00 Name: ENSBTAP00000045382/1-133 Len: 189 Check: 4927 Weight: 1.00 // 1 50 BACU015549/1-171 MDVIRLLLAT LLVCLCSLTA YSHLAPEEKP RDERSLRSNS SMNLLDFPSV ENSP00000454804/1-132 MDVTRLLLAT LLVFLCFFTA NSHLPPEEKL RDDRSLRSNS SVNLLDVPSV bmy_00563T0/1-174 MDVTRLLLAT LLVCLCSLTA YSHLAPEEKP RDERSLRSNS SMNLLDFPSV ENSTTRP00000003406/1-132 MDVTRLLLAT LLVCLCFLTA YSHLAPEEKP RDERSLRSNS SMNLLDFPSV ENSBTAP00000045382/1-133 MDVSRLLLAT LLVCLCFLTA YSHLAPEEKP RDERNLKNNS SMNLLDFPSV 51 100 BACU015549/1-171 SIVAQGPQRL ALLLLSLKHR TRNPKRSAEK KRKKRKDLPR KEFYTD---- ENSP00000454804/1-132 SIVALN---- -------KKS KQIGRKAAEK KR-------- ---------- bmy_00563T0/1-174 SIVAQGPQRL ALLLLSLKHR TRNPKRSAEK KRKKRKDLPS PRSSQAEVRI ENSTTRP00000003406/1-132 SIVAQN---- -------KKS KKISRKEAEK KR-------- ---------- ENSBTAP00000045382/1-133 SIVALN---- -------KKS KKISRNEAEK KKR------- ---------- 101 150 BACU015549/1-171 ---------- ---GSQRDGS YCQLSQLAMG VVEPGRWHHL MVMMMMMAMM ENSP00000454804/1-132 ---------- ---SSKKEAS MKKVVRPRTP LSAP------ -------CVA bmy_00563T0/1-174 SGADVDCSGS PGVSPQKKDS MKKVARPRPP PPGP------ -------CVA ENSTTRP00000003406/1-132 ---------- ---SSKKKAS MKKVAQPRPP PPGP------ -------CVA ENSBTAP00000045382/1-133 ---------- ---PSKRKAP MKNVARTRPP PPTP------ -------CVA 151 200 BACU015549/1-171 IVPSCYLRSP ANSFIPLTLE DFHIFQSS-S LEFLDPVAA ENSP00000454804/1-132 TRNSCKPPAP ACC-DPCASC QCRFFRSACS CRVLSLNC- bmy_00563T0/1-174 TRDSCKPPAP ACC-DPCAFC QCRFFRSACS CRVLSPTC- ENSTTRP00000003406/1-132 SRDSCKPPAP ACC-DPCAFC QCRFFRSACS CRVLNPTC- ENSBTAP00000045382/1-133 TRDSCKPPAP ACC-DPCAFC QCRFFRSACS CRVLNPTC-