Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPX2 ENSTTRG00000007926 (Bottlenosed dolphin)

Gene Details

TPX2, microtubule-associated, homolog (Xenopus laevis)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007500, Bottlenosed dolphin)

Protein Percentage 98.46%
cDNA percentage 98.74%
Ka/Ks Ratio 0.32117 (Ka = 0.0075, Ks = 0.0233)

BT.28741 ENSBTAG00000018775 (Cow)

Gene Details

targeting protein for Xklp2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049473, Cow)

Protein Percentage 91.22%
cDNA percentage 92.01%
Ka/Ks Ratio 0.20158 (Ka = 0.0435, Ks = 0.2157)

TPX2  (Minke Whale)

Gene Details

TPX2, microtubule-associated

External Links

Gene match (Identifier: BACU015588, Minke Whale)

Protein Percentage 95.54%
cDNA percentage 96.43%
Ka/Ks Ratio 0.67172 (Ka = 0.0321, Ks = 0.0478)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2187 bp    Location:347601..393090   Strand:+
>bmy_00516
ATGTCACAAGTTACAACCTCCTATTCCTATGATGCTCCAACAGACTTCATCAATTTTACATCTTTGAATGATGAGGAAGATACCCAAAACATAGATTCCTGGTTTGAAGAGAAGGCCAATTTGGAGAATAAGTTTCCTGGGAAGAGTGGTACAGGAGGGCTTTTTCAGGGCAAAACTCCTCTGAGAACAGCTAATCTTCAGCAAGATGTCACACCTTTGAGACCAGTTGACAACACTTATAACAAAGAGGCAGAAAAAGAAAACCTGGTGGAAGAGTCCATTCCAACAAATGTTTGTTCTTCTCTGAAAGTCAAAGGAACCACATCAAGAAATATTCTAGCTCAGCCTCAGAGAAGATCTCTTAGGCTCTCTGCTCAGAAGAATTTGGAACAGAAAGAAAAACATCATGTACAAATGAAAGCCAAGAGATGTGCTACTCCTGTAATCGTCAATGAAATTCCACCCTCCAAAAAAATGAAAGTTTCTCACAATAAAAAGAAGCCAGAGGAAGAGGAAGAAGGCAGTGCTCATCAAGATACTTCTGAAAAGAATGAGTCTTCCCCAGAGAAAGCCAAGGGCAGACATACTGTGCCTTGTATCCCACCTGTAAGGCAGAAGATTCTAAAAAGTACTGAGGAGCAGGAGTTGGAGAAGAGAATGAAAATGCAGCAAGAGGTGGTAGAGATGCGGAAAAAGAATGAAGAATTCAAGAAATTTGCTCTTGCAGGAGCAGGGCTCCCTGTGAAGAAATCAGTGAGCCAGGTAACCAAATCAGTTGACTTCCACTTCCTCACAGATGAGCGAATCAAACAACATCCTAAGAACCAGGAGGAGTATAAGGAAGTGAACTTTACATCTGAACTGCGAAAGCATCCTCCATCTCCTGCCCGAGTGACTAAGGGATGCACCATTGTTATGCCTTTCAACCTGTCCCAGGGAAAGAAAAGAACATTTGGTGAGACAGCTTCTACGTATGTGCCCCTTGCACAGCAGGTTGAAGCCTTCCATAAACGAACCCCTAACAGATATCACTTGAGGAGCAAGAAGGATGATATTACTCTGTTACCCTCCAAATCTGTGGCCAAGATATGCAGAGACCCACAGACTCCTGTGCTGCAAACCAAACAGCGTGCAAGACCTGTGACCTGCAAAAGTGCAGCGGAACAGGAGGCTGAGGAGCTCGAGAAACTGCAGCAATACAAATTCAAAGCACAGGAACTTGATCCCAGAATTCTTGAAGGTGGGCCCATCTTGCCTAAGAAACCTCCTGTGAAGCCATCCACTCAGCCTATTGGCTTTGATTTGGAAATTGAGAAGAGGATCCAGGAGCGAGAGTCAAAGAAGAAATTGGAGGATGAACACTTTGAATTTCATTCTAGGCCCTGCCCTACTAAGATCTTGGAAGATGTTGGWGTTCCTGAAAAGAAAGTACTTCCAATCACTGTCCCCAAGTCACCGGCCTTTGCTCTGAAGAACAGAATCAGAATGCCCACCAAAGAAGATGAGGAAGAGGAGGAGCCAGTAGCGATAAGAGCTCAACCTGTGCCATATTTTGGAATGCCTTTTAAGCCCCAAATCCCAGTGGGGAGAACTGTGGAAATATGCCCTTTCTCTTTTGATTCTCGAGACAAAGAACGTCAGTTACAGAAGGAGAAGAAAATAAAAGAACTGCAGAAAGGGGAGGTGCCCAAATTCAAGGCGCTTCCTTTGCCTCATTTTGACACCATTAACCTGCCGGAGAAGAAGGTGAAGAATACAACCCAGGTTGAGCCTTTCTGCTTTGAGACCGACAGAAGAGGTGCTCTGAAGGCACAGACTTGGAAGCACCAGCTGGAGGAAGAACTAAAACAGCAGAAAGAAGCAGCTTGCTTCAAGGCTCGTCCAAACACCGTCATCTCCCAGGAGCCCTTTGTTCCTAAGAGAGAGAAAAAATCCCTTACTGGTAGTATTTTATGTATTCTTGGGGGATTGGGGCAGAATGAGGGCCTTTCTGGTTCTGTAGTTCAAGAAACTTTTCAGCTGGCCACTGAGAAGAGAGCCAAGGAGCGGCAGGAGCTGGAGAAGAGAATGGCTGAGGTACACAAGGCAAATCCAGTACGAAGGTACCAGGGTGTGGAAGTCAAGTCAAGTGACCAGCCCTTGACCGTGCCTGTATCGCCTAAGTTCTCCACTCGATTCCACTGCTAA

Related Sequences

bmy_00516T0 Protein

Length: 729 aa      View alignments
>bmy_00516T0
MSQVTTSYSYDAPTDFINFTSLNDEEDTQNIDSWFEEKANLENKFPGKSGTGGLFQGKTPLRTANLQQDVTPLRPVDNTYNKEAEKENLVEESIPTNVCSSLKVKGTTSRNILAQPQRRSLRLSAQKNLEQKEKHHVQMKAKRCATPVIVNEIPPSKKMKVSHNKKKPEEEEEGSAHQDTSEKNESSPEKAKGRHTVPCIPPVRQKILKSTEEQELEKRMKMQQEVVEMRKKNEEFKKFALAGAGLPVKKSVSQVTKSVDFHFLTDERIKQHPKNQEEYKEVNFTSELRKHPPSPARVTKGCTIVMPFNLSQGKKRTFGETASTYVPLAQQVEAFHKRTPNRYHLRSKKDDITLLPSKSVAKICRDPQTPVLQTKQRARPVTCKSAAEQEAEELEKLQQYKFKAQELDPRILEGGPILPKKPPVKPSTQPIGFDLEIEKRIQERESKKKLEDEHFEFHSRPCPTKILEDVGVPEKKVLPITVPKSPAFALKNRIRMPTKEDEEEEEPVAIRAQPVPYFGMPFKPQIPVGRTVEICPFSFDSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNTTQVEPFCFETDRRGALKAQTWKHQLEEELKQQKEAACFKARPNTVISQEPFVPKREKKSLTGSILCILGGLGQNEGLSGSVVQETFQLATEKRAKERQELEKRMAEVHKANPVRRYQGVEVKSSDQPLTVPVSPKFSTRFHC*