Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTNS ENSTTRG00000001207 (Bottlenosed dolphin)

Gene Details

cystinosin, lysosomal cystine transporter

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001133, Bottlenosed dolphin)

Protein Percentage 89.43%
cDNA percentage 92.95%
Ka/Ks Ratio 0.79173 (Ka = 0.0724, Ks = 0.0915)

CTNS ENSBTAG00000000831 (Cow)

Gene Details

Cystinosin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049590, Cow)

Protein Percentage 89.14%
cDNA percentage 90.57%
Ka/Ks Ratio 0.25092 (Ka = 0.0675, Ks = 0.2688)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location:4618787..4639416   Strand:+
>bmy_00202
ATGTGCTGTGCAGCCCAGAACAGAGCCTCGGGCTGGTATGAGAGGGAGTCCACGGTCGACTTCTCTGTTCCTCCCACCGTGAAGCTGGAAAATGGAAGCTCCACCAACGTCAGCATCTCCCTCCCGCGTGCTTTAAATGCAACCTTGGTGATCACTTTTGAAATCACATTTCGTTCAAAAAACGTTACTATCCTTCAGCTCCCTGATGAAGTAATGACGTCTCAAAATGTTGGACAAGTTACCACTTATCTGCACGGAAATCACTCCAACCAGACCAGCCCAAGGATACGCTTCTCCGTGATCCACAGCAATGTCGTCAGCATCATAAACCAGGTGATCGGCTGGATCTACTTTGTGGCCTGGTCCATCTCCTTCTACCCGCAGGTGATCACCAACTGGAAGCGGAAAAGTGTCGTGGGTCTGAGCTTTGACTTCGTGGCCCTGAACCTGATGGGCTTCGTGGCCTACAGCGTGTTCAACATTGGCCTCCTCTGGGTGCCCTCCATCAAGGAGCAGTTTCTCCTCAAATACCCCAATGGCGTGAACCCCGTGGACAGTAATGACGTCTTCTTCAGCCTGCACGCGGTCGCCCTCACCCTGGTTATCATGGTGCAGTGCTTCCTGTACGAGCGAGGCAACCAGCGGGTGTCCTGGCTGGCCATCAGCTTCCTCGTGCTCTCCTGGCTCTTCACACTCATCACCCTGATCATGGCCGCGGTCAGGGCCACTACGTGGCTGCAGTTTCTCTTCTGCTTCTCCTACATCAAGCTGGCGGTGACACTGGTCAAGTATTTTCCACAGGCCTACTTGAACTTTTACTACAAAAGCACTGAGGGCTGGAGCATTGGCAACGTGCTTCTGGACTTCACTGGGGGCAGCTTCAGCCTCCTGCAGATGTCCCTCCAGTCCTACAACAACGACCAGTGGACGCTGATCTTTGGAGACCCGACCAAGTTTGGCCTCGGCATCTTCTCCATCTTCTTCGATGTTGTCTTCTTCATCCAGCATTTCTGCTTGTACAGAAAGAAACCAGGGTATGACCAGCTGAACTAG

Related Sequences

bmy_00202T0 Protein

Length: 351 aa      View alignments
>bmy_00202T0
MCCAAQNRASGWYERESTVDFSVPPTVKLENGSSTNVSISLPRALNATLVITFEITFRSKNVTILQLPDEVMTSQNVGQVTTYLHGNHSNQTSPRIRFSVIHSNVVSIINQVIGWIYFVAWSISFYPQVITNWKRKSVVGLSFDFVALNLMGFVAYSVFNIGLLWVPSIKEQFLLKYPNGVNPVDSNDVFFSLHAVALTLVIMVQCFLYERGNQRVSWLAISFLVLSWLFTLITLIMAAVRATTWLQFLFCFSYIKLAVTLVKYFPQAYLNFYYKSTEGWSIGNVLLDFTGGSFSLLQMSLQSYNNDQWTLIFGDPTKFGLGIFSIFFDVVFFIQHFCLYRKKPGYDQLN*