KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:48 2014 Check: 00 .. Name: ENSP00000371294/1-400 Len: 407 Check: 183 Weight: 1.00 Name: ENSBTAP00000049590/1-367 Len: 407 Check: 8888 Weight: 1.00 Name: bmy_00202T0/1-350 Len: 407 Check: 3143 Weight: 1.00 Name: ENSTTRP00000001133/1-399 Len: 407 Check: 7786 Weight: 1.00 // 1 50 ENSP00000371294/1-400 -------MIR NWLTIFILFP LKLVEKCESS VSLTVPPVVK LENGSSTNVS ENSBTAP00000049590/1-367 -------MIR RWLVIFILFP LQLIEKCEST VDFSVPPIVK LEKGSSTSVS bmy_00202T0/1-350 MCCAAQNRAS GWY------- -----EREST VDFSVPPTVK LENGSSTNVS ENSTTRP00000001133/1-399 -------MIR RWLVIFSLFP LKLIEKCEST VNFSVPPTVK LENGSSTNVS 51 100 ENSP00000371294/1-400 LTLRPPLNAT LVITFEITFR SKNITILELP DEVVVPPGVT NSSFQVTSQN ENSBTAP00000049590/1-367 ISLPRPLNAT LVITFEITFR SKNVTILQLP DEVVVPPGTT NSSFRVTSQS bmy_00202T0/1-350 ISLPRALNAT LVITFEITFR SKNVTILQLP DEV------- -----MTSQN ENSTTRP00000001133/1-399 ISLPRPLNAT LVITFEITFR SKNITILQLP DEVVVPPGVT NSSFQVTSQN 101 150 ENSP00000371294/1-400 VGQLTVYLHG NHSNQTGPRI RFLVIRSSAI SIINQVIGWI YFVAWSISFY ENSBTAP00000049590/1-367 VGQVTTYLHG NHSNQTSPRI RFLVIHSNIV SIINQVIGWI YFVAWSVSFY bmy_00202T0/1-350 VGQVTTYLHG NHSNQTSPRI RFSVIHSNVV SIINQVIGWI YFVAWSISFY ENSTTRP00000001133/1-399 VGQVTTYLHG NHSNQTSPRI LFSVIHSNVV SIINQVIGWI YFVAWSVSFY 151 200 ENSP00000371294/1-400 PQVIMNWRRK SVIGLSFDFV ALNLTGFVAY SVFNIGLLWV PYIKEQFLLK ENSBTAP00000049590/1-367 PQVITNWRRK SVVGLSFDFV VLNLMGFVAY SVFNIGLFWV PSIKEQFLLK bmy_00202T0/1-350 PQVITNWKRK SVVGLSFDFV ALNLMGFVAY SVFNIGLLWV PSIKEQFLLK ENSTTRP00000001133/1-399 PQGIANWRRK SVVGLSFDFV ALNLMGFVAY SVFNIGLFWV PSIKEQFLLK 201 250 ENSP00000371294/1-400 YPNGVNPVNS NDVFFSLHAV VLTLIIIVQC CLYERGGQRV SWPAIGFLVL ENSBTAP00000049590/1-367 YPNGVNPVDS NDVFFSLHAV ALTLVVIVQC LLYERGSQRV SWLAISFLVL bmy_00202T0/1-350 YPNGVNPVDS NDVFFSLHAV ALTLVIMVQC FLYERGNQRV SWLAISFLVL ENSTTRP00000001133/1-399 YPNGVNPVDI NDVFFSLHAV ALTLVIVVQC FLYERGNQRV SWLAVGFLVL 251 300 ENSP00000371294/1-400 AWLFAFVTMI VAAVGVTTWL QFLFCFSYIK LAVTLVKYFP QAYMNFYYKS ENSBTAP00000049590/1-367 SWLFTLIALI MAAVGATTWL QFLFCFSYIK LAVTLVKYFP QAYMNFHYKS bmy_00202T0/1-350 SWLFTLITLI MAAVRATTWL QFLFCFSYIK LAVTLVKYFP QAYLNFYYKS ENSTTRP00000001133/1-399 SWLFTFITLI MAAVRATTWL QFLFCFSYIK LAVTLVKYFP QAYLNFYYKS 301 350 ENSP00000371294/1-400 TEGWSIGNVL LDFTGGSFSL LQMFLQSYNN DQWTLIFGDP TKFGLGVFSI ENSBTAP00000049590/1-367 TEGWSIGNVL LDFTGGSFSL LQMFLQSYNN DQWTLIFGDP TKFGLGIFSI bmy_00202T0/1-350 TEGWSIGNVL LDFTGGSFSL LQMSLQSYNN DQWTLIFGDP TKFGLGIFSI ENSTTRP00000001133/1-399 TEGWSIGNVL LDFTGGSFSL LQMFLQSYNN DQWTLIFGDP TKFGLGIFSI 351 400 ENSP00000371294/1-400 VFDVVFFIQH FCLYRKRPGL QAARTGSGSR LRQDWAPSLQ PKALPQTTSV ENSBTAP00000049590/1-367 IFDVVFFIQH FCLYRKKPGY ---------- ---D-QLN-- ---------- bmy_00202T0/1-350 FFDVVFFIQH FCLYRKKPGY ---------- ---D-QLN-- ---------- ENSTTRP00000001133/1-399 FFDVVFFIQH FCLYRKKPGL QAARRASGSR PRQD-ALSLE PKAWPQATSV 401 450 ENSP00000371294/1-400 SASSLKG ENSBTAP00000049590/1-367 ------- bmy_00202T0/1-350 ------- ENSTTRP00000001133/1-399 SGSSLKD