Sequence details bmy_00071 (Coding sequence)

Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTCRA ENSTTRG00000006975 (Bottlenosed dolphin)

Gene Details

pre T-cell antigen receptor alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006596, Bottlenosed dolphin)

Protein Percentage 79.46%
cDNA percentage 81.78%
Ka/Ks Ratio 0.504 (Ka = 0.1697, Ks = 0.3368)

PTCRA ENSBTAG00000017097 (Cow)

Gene Details

Pre T-cell antigen receptor alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044273, Cow)

Protein Percentage 74.74%
cDNA percentage 82.7%
Ka/Ks Ratio 0.68185 (Ka = 0.1835, Ks = 0.2691)

PTCRA  (Minke Whale)

Gene Details

pre T-cell antigen receptor alpha

External Links

Gene match (Identifier: BACU019248, Minke Whale)

Protein Percentage 79.83%
cDNA percentage 84.41%
Ka/Ks Ratio 0.51178 (Ka = 0.1447, Ks = 0.2828)

Additional orthologs identified in other species via the OPTIC pipeline.

PTCRA (Human)  

Genome Location

Sequence Coding sequence

Length: 1086 bp    Location:4851375..4841632   Strand:-
Raw sequence 
>bmy_00071
ATGCAGCTGGGCCTGTGGCCTGCGAGGCAGTCCTGTGGCCGCCTCCTCCCCCAGCCCACAGCCCAGGTCTGCAGTTGGGTCCTGCCTCTTCTCACGTGGGCCATGCCTGGGACTTGGCTGCTGCTTCTCCTGGCCCTCGGGTGTCCAGCCCTGCCCACAGGTGTGGGCAGCACACCCTTCCCCTCTCTGGCCCCACCAATCACACTGCTGGTGGATGGGAAGCAGCAGACTCTGGTGGTTTGCCTGGTCCTCGACGTTGCACCCCCTGGCCTTGAGAGTCCCATCTGGTTCTCAGCTGGGAATGGCAGCTCACTGGATGCCTTCACCTATGGCCCTTCCCCAGCAGCTGATGGCACCTGGACTAGCTTGGCTCAGCTTTCCCTGCCCTCTGAGGACCTGGCAGCCTGGGAGACCCTGGTCTGCCACACTGGGCCTGGGACTGGGGACCACAGCCAGAGCACACAGCCTCTACAGCTGTCAGGGACCCGGGGCCAGGCGCTGCGGCTCGGGGCGCTGCGGCTGCTGCTCTTCAAGCTGCTGCTGTTGGATGTGCTTCTGACCTGCAGCCGCTTCCGCGCCCCGCCCGCCGCGCGGGGGGACCCGGCCCGGGCGCCTCGCCCTGGGGACCCCGGGCTCCCCGCGGCCCCGCGGGCGGACCACCTTCTCCGCCCGCAGCCTCCGCCACCGGGAGGATCGCCCGCAGCCCCCACCGACTGGATTCGCCGCAGTGATGGGTGGACCACAGGCCGAGGGCTCAGCCTGTCCACCCCGCCCGCGCTGCAGCCCCGGGACGGCCGCTGGGTTCACACCCGCCATCCGGGTCGGGATCCCAGGAGCCCTGTCTGGGAGGAGGGGCCGCTGGACCAGGGCGCTGCTTCCTCTCCTCTAGCCCTGGTCCTCCAGCCCCTCCCAGAGCCTCCGTTATGGGATGGGAAAAGATGTTGCCATAGGTCACTGCGGGCACCATCCGCTCTCTCATTGGCCGAGGCCGAAAAAAGATCGTCCTCCCTTTCGCTAGAAGCAAACCCCGAAAAGCCCATTGGCTGCCTAGTCCGCGGGCCTCCGTCGGCTCTGGGGGCCGGATGA

Related Sequences

bmy_00071T0 Protein

Length: 362 aa      View alignments
>bmy_00071T0
MQLGLWPARQSCGRLLPQPTAQVCSWVLPLLTWAMPGTWLLLLLALGCPALPTGVGSTPFPSLAPPITLLVDGKQQTLVVCLVLDVAPPGLESPIWFSAGNGSSLDAFTYGPSPAADGTWTSLAQLSLPSEDLAAWETLVCHTGPGTGDHSQSTQPLQLSGTRGQALRLGALRLLLFKLLLLDVLLTCSRFRAPPAARGDPARAPRPGDPGLPAAPRADHLLRPQPPPPGGSPAAPTDWIRRSDGWTTGRGLSLSTPPALQPRDGRWVHTRHPGRDPRSPVWEEGPLDQGAASSPLALVLQPLPEPPLWDGKRCCHRSLRAPSALSLAEAEKRSSSLSLEANPEKPIGCLVRGPPSALGAG*