Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN11 ENSTTRG00000006905 (Bottlenosed dolphin)

Gene Details

calpain 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006535, Bottlenosed dolphin)

Protein Percentage 92.37%
cDNA percentage 93.97%
Ka/Ks Ratio 0.33323 (Ka = 0.0468, Ks = 0.1404)

CAPN11 ENSBTAG00000021066 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004690, Cow)

Protein Percentage 90.77%
cDNA percentage 90.84%
Ka/Ks Ratio 0.13191 (Ka = 0.0476, Ks = 0.3605)

CAPN11  (Minke Whale)

Gene Details

calpain 11

External Links

Gene match (Identifier: BACU015816, Minke Whale)

Protein Percentage 98.68%
cDNA percentage 98.43%
Ka/Ks Ratio 0.11197 (Ka = 0.0063, Ks = 0.0566)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location:3825372..3814448   Strand:-
>bmy_00033
AACTACAACAACCAGAGCTTTGAGGAGCTGAGAGCACTCTGCCTGCGGAAGGGGGAGCTGTTCAAGGACCCCTTTTTCCCCGCTGAACCCAGTTCACTGGGCTTCAAGGAACTGGGTCCCAACTCCAAACACGTGCAGAACATCAGCTGGCAGCGGCCCAGTCAAATCACAAGCAATCCTCAATTCATTGTGAATGGGGTTAGCCCGACGGACATCTGCCAGGGAGTGCTCGGGGACTGCTGGCTGCTGGCTGCCATCGGCTCCCTTACTGTGTACCCCAAACTGCTGTACCGCGTGGTGCCCAGGGGGCAGAGCTTCAAGAAAAACTATGCTGGCATCTTCCATTTTCAGATTTGGCAGTTTGGGCAGTGGGTGGACGTGGTGGTGGATGACCGGCTGCCCACAAAGAATGGCAAGCTGGTGTTCGTGCACTCAGCCGAGTGCACCGAGTTCTGGAGTGCCCTGCTGGAGAAGGCGTACGCCAAGCTGAACGGATCCTATGAAGCCCTGTCTGGGGGCAGCACGGTGGAGGGCTTTGAGGACTTCACGGGGGGCATCAACAGCCAAAGTGACTTGGAGTCGTTGACGCAGAGGATGCTGGTGAGAGGACATGCTTACTCGGTGACCGGCCTTCAGGATGTCCTGTACCGCGGCAGGATGGAAACACTGATTCGGGTCCGGAATCCCTGGGGCCGGATTGAGTGGAATGGAGCCTGGAGTGACAAGATGTCCTACCAAGATTTCCTGGACAACTTCACCCTCCTGGAAATCTGCAACCTGATACCCGACACGCTTTGTGGGGACTACAAGAGGTGTTGGCACACCACCTTCTACGAGGGCAGCTGGAGGAGGGGCAGCACTGCAGGGGGCTGCCGGAGCTACACTGACACATTCTGGACCAACCCACAGTTTAAGATCTCTCTCCCCGAGGAGGATGATGCCCCAGAGGACGACGAAGCTGTCTGCACCTGCCTGGTGGCCCTGATGCAGAAGAACTGGAGGCGGGCACGGCCCCAGGGAGCCCAGCTGCAGACCATCGGCTTTGTCATCTACTCTTTTCAGAACCTCCAGGACGTCCACTTGAAAAAGGACTTCTTCGTGAAGTATCAGGACCTGGGCTTCTCAGAGATCTTCACTAACTCACGGGAGGTGAGCAGCCACCTCCGGCTGCCTCCGGGGGAATACATCATCATTCCCTCCACCTTTGAGCCGCACAAGGATGCTGACTTCCTGCTCCGGGAGAACATCTCTGAGAATGACATAGACCAGGACTTCATACGTTTGTTTCACATAGTGGCAGGTGGAGAGGACAAGGAGGTGGGCATGTATGAGCTACAGAAGCTGCTCAACAAGGTGGTCTCCAAAGTCAAAAACCTCAAAACCAAGGGTTTCAGCCTGGACGTGTGCCGCTGTATGGTCAACCTCTTGGATGACATCTTCCGAGAGTGTGACCAGGACCACTCAGGCACCTTGAACTCCTATGAGATGCGCTTGGCAATTGAGAAAGCAGGCATCAAACTGAATAACAAGGTGACACAGGTGTTGGTGGCCAGGTATGCAAATGACGAAATGATCATGGACTTTGACAGCTTCATCAGCTGTTTCCTGAGGCTGAAGGCCATGTTC

Related Sequences

bmy_00033T0 Protein

Length: 542 aa      View alignments
>bmy_00033T0
NYNNQSFEELRALCLRKGELFKDPFFPAEPSSLGFKELGPNSKHVQNISWQRPSQITSNPQFIVNGVSPTDICQGVLGDCWLLAAIGSLTVYPKLLYRVVPRGQSFKKNYAGIFHFQIWQFGQWVDVVVDDRLPTKNGKLVFVHSAECTEFWSALLEKAYAKLNGSYEALSGGSTVEGFEDFTGGINSQSDLESLTQRMLVRGHAYSVTGLQDVLYRGRMETLIRVRNPWGRIEWNGAWSDKMSYQDFLDNFTLLEICNLIPDTLCGDYKRCWHTTFYEGSWRRGSTAGGCRSYTDTFWTNPQFKISLPEEDDAPEDDEAVCTCLVALMQKNWRRARPQGAQLQTIGFVIYSFQNLQDVHLKKDFFVKYQDLGFSEIFTNSREVSSHLRLPPGEYIIIPSTFEPHKDADFLLRENISENDIDQDFIRLFHIVAGGEDKEVGMYELQKLLNKVVSKVKNLKTKGFSLDVCRCMVNLLDDIFRECDQDHSGTLNSYEMRLAIEKAGIKLNNKVTQVLVARYANDEMIMDFDSFISCFLRLKAMF