Sequence details bmy_22226 (Coding sequence)

Part of scaffold_3795 (Scaffold)

For more information consult the page for scaffold_3795 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NLRP13 ENSBTAG00000006961 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054745, Cow)

Protein Percentage 59.19%
cDNA percentage 68.66%
Ka/Ks Ratio 0.2925 (Ka = 0.3098, Ks = 1.0591)

Additional orthologs identified in other species via the OPTIC pipeline.

NLRP13 (Human)  

Genome Location

Sequence Coding sequence

Length: 3027 bp    Location:22999..50020   Strand:+
Raw sequence 
>bmy_22226
ATGACTTCTCCTAGCATCTTTGTAGATGATGGCTCCAGTGATAAGCTGCTGTCTCACCTGATGGGCTTGGATCGGTATCAGCTGGAAGATTTCAAACTTTGCGTCCAGTCCCCACAGCTGCTGCCTGAGAACGTCCAGAAGATCTCCTGGGCAAACTTGAAAGCCATCAGTCCCACTAACCTGCTCTGTCTGTTGAAGGAACACTTATCAGTAAGGCAGATATGGGACGTGACCCTCCGCATCTTTGAGCACATGAAGCTGACTTCGCTATGCGAGCAAATGAGAGCGGAGATGAATGTATCACCTTCCCTGGTGGTTTCCAGATCCTACATCATCACTGAGGATGATGCCAGACAGGCGGTATCAGAACTGGGAGGGTCTTCACCATCTCACGAAATTAGATTTAAATTCCAGGCTGTTCATTTGATAGCCAAAGGGAAAGATGGCRCAGGTATGGGGACCCCAAGATCCAAACCAAGAAGAACCAGAGATGCTGGAAGAAGAAACAGCACGGTGAAGCGGGAACACGGATTGCTAAGGAGCCTACTGCGTCCTAACAGGGCTGGAGCCCAGCCACTGACGATCGTACTGGAGGGCCTGGCGGGCGTTGGGAAGACCACCCTGGCAATGAAGGTCATGCTACACTGGGCAGAGGGCATACTCTTTCAGCACCAGTTCTCCTATGTTTTCTACATCAGCTGCCATAAAGTGGGAGAGACTGTGAACACCACCTTTGCTGGCCTGCTTTCCCGAGACTGGCCTGACTCTCAGGTCCCCATCGAAGAGTTCAGGAGTCATCCCGAGAGGCTCCTGTTTGTCATTGATGGCTTTGAAGAAATGACTGTGTCTTCCAACTCGTACGAAAGCCCGCCCTGTACAGACTGGTACCAGCAGCTCCCAGTGGCCAGAATCTTACTCTACTTGTTGAAGAAGGAGTTGGTTCCCACAGCTACCTTACTGATAACGACCAGAGACTATGGTAATCGAGATCTTAAAAATGTGTTAGTGAATCCATGCTTTGTTGTCGTCTCAGGGTTCACAGAGGGAGACCGGGAGGAGTATTTCTTCAAGTTCTTTGGTGACCTAGACAAAGCTAATAAAATCTTGAATCGGATAAGAAAAATGGAAACTCTATTTGATTCCTGCTCTGCCCCCCTGGTGTGCTGGACTGTGTGTTCCAGCCTGAAGTGGCAGACGGCAAGTAATCCTTCTTTCCGGCTGGCCACACAGACCACCACCAGCATCTATGCCTACTTTTTCTGCAGCTTGTTTGCCACGGCAGAGGTGAGCTTGTCAGATCAGAGCTTGCCAGAACAGTGGAGAGCCTTGTGTTCTCTGGCTGCAGAGGGGATGTGGTTCTCAAACTTCACATTTGCAAAAGAGGTCATGGAACAAGGGCATCTGGAAGCCTCTTTTATTGATTCTCTCTTGAGGTTGAATATTCTTCGAAAGGTCAGTGACTGTGAAGAGTGCATTTCTTTCACTCACCAAGGTTTCCAGGCATTTTTGGGGGCCATGTTTTATGTGCTCTGGGRAACAAGAGGATCCCTTGGTGGTCCCCCAAAGCATCAAGAGATGAGGGTGYTCCTGAATGACGCCTTTGCCAACACAAACTTCTATTGGCATCAGATGGCTCTTTTTTTCTTCGGTCTTTTAAATAYAGACCTAGCAAGAGAGCTAGAAGATACTTTACGCTGTGAAATGTCTCCCAGGGTAATGGACGAATTATTAGATTGGGCAGAAGGGTTGGAGAAGTATGATGCTGTCTCAGTCCACTTCGAATTCCTACAGTTTTTCCAGTGCTTATGTGAGACTCAGGACGAAAATTTTATAAGGCAGATTTTGAATCACCTCCTTGAAGCTGATCTCGACATTCATGRGTATCAGCACCTCCAGGTTTCTTCCTTTTGCCTAAAGCACTGTCAAAAGTTACGGGTTGGCGATTTCAGGAAACATCAGTGGGAGGATATCTGCTCTGTGTTTTGCAATGGGAACATGAGAGAGCTGGACCTGAGTAACAGCAAGCTTAATACTTCATCTATGAAGGAACTCTGTTATAAGCTGAGAAATCCAAGGTGCAAACTCCAAAAACTGACGTGCAAATCGATGTCTCCTGTGAAGATTCTGAAGGAGCTTGTCATCGTGCTTCATGGTAACCACAAGCTGACCCACCTGGATCTGAGCTCTAACAACCTAGGAATTACTGTGTCCAAGATGATTTTTAGAACTTTGAGGCACTCAGCCTGCAACCTCAAGTATCTGTGCCTGGAGAAATGCAACCTGTTGGCGGCCCACTGTCAGGACCTGGCCTTGCTTCTCATCAGCACCCAGGGAATGACTCGACTGTGCCTGGGAATTAATCAGCTCCAGAATGATGATGTGAGGCTGCTGTGTGCTTCCCTGACTCACCCCGAGTGTGTCTTAGAGAGACTGGTGCTCTGGTCCTGCCAGCTTGGTGCACCCAGTTGTAGATATTTGTCAGACGCTCTCCTCCAGARTAAGAGCTTGACACACCTGAATCTGCGGAAGAATAACCTGGGAGATGAGGGAGTGAAGTTTCTGTGTGAGGCCCTGAGTCGTCCAGATTGTAACCTGCAGACCCTGAACTTGTCAGATTGTTCTTTCACGGTGGAGGGCTGTCGGGAGCTTACTCACGCCCTCAAGTACAATCATAATGTGAAAATTCTGGATGTTGGGAAAAATGATGTTCAGGATGATGGGGTGAGAGAGCTGTTGGAGAAATGCAATTTGACACCTGGTTGCTGCTGGCCTCTGTCCTCAGTTCTCAGAAGCAGTAAAAGCCTGGTTAATCTGAACCTTCTAGGGAATGACCTGGGGCCAGAGGGAGTCAACACGCTGTGGACGTCCTTGAAAAAATCGACGTGCAAACTACGGAAACTCGGGCTCGAAAAAGACTTGTACTCTGTAGTGAGAGCAGAGTTGGAGAAGTTACAGGAGAAGGGGTCCTTTTTGAGAATCAAGTCTCAGTGGGATTTTAATGACCCTGAAGACAGATGGTGGTGGTGA

Related Sequences

bmy_22226T0 Protein

Length: 1009 aa      
>bmy_22226T0
MTSPSIFVDDGSSDKLLSHLMGLDRYQLEDFKLCVQSPQLLPENVQKISWANLKAISPTNLLCLLKEHLSVRQIWDVTLRIFEHMKLTSLCEQMRAEMNVSPSLVVSRSYIITEDDARQAVSELGGSSPSHEIRFKFQAVHLIAKGKDGXGMGTPRSKPRRTRDAGRRNSTVKREHGLLRSLLRPNRAGAQPLTIVLEGLAGVGKTTLAMKVMLHWAEGILFQHQFSYVFYISCHKVGETVNTTFAGLLSRDWPDSQVPIEEFRSHPERLLFVIDGFEEMTVSSNSYESPPCTDWYQQLPVARILLYLLKKELVPTATLLITTRDYGNRDLKNVLVNPCFVVVSGFTEGDREEYFFKFFGDLDKANKILNRIRKMETLFDSCSAPLVCWTVCSSLKWQTASNPSFRLATQTTTSIYAYFFCSLFATAEVSLSDQSLPEQWRALCSLAAEGMWFSNFTFAKEVMEQGHLEASFIDSLLRLNILRKVSDCEECISFTHQGFQAFLGAMFYVLWXTRGSLGGPPKHQEMRVXLNDAFANTNFYWHQMALFFFGLLNXDLARELEDTLRCEMSPRVMDELLDWAEGLEKYDAVSVHFEFLQFFQCLCETQDENFIRQILNHLLEADLDIHXYQHLQVSSFCLKHCQKLRVGDFRKHQWEDICSVFCNGNMRELDLSNSKLNTSSMKELCYKLRNPRCKLQKLTCKSMSPVKILKELVIVLHGNHKLTHLDLSSNNLGITVSKMIFRTLRHSACNLKYLCLEKCNLLAAHCQDLALLLISTQGMTRLCLGINQLQNDDVRLLCASLTHPECVLERLVLWSCQLGAPSCRYLSDALLQXKSLTHLNLRKNNLGDEGVKFLCEALSRPDCNLQTLNLSDCSFTVEGCRELTHALKYNHNVKILDVGKNDVQDDGVRELLEKCNLTPGCCWPLSSVLRSSKSLVNLNLLGNDLGPEGVNTLWTSLKKSTCKLRKLGLEKDLYSVVRAELEKLQEKGSFLRIKSQWDFNDPEDRWWW*