Sequence details bmy_22001 (Coding sequence)

Part of scaffold_3447 (Scaffold)

For more information consult the page for scaffold_3447 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPAP2  (Minke Whale)

Gene Details

RNA polymerase II associated protein 2

External Links

Gene match (Identifier: BACU002815, Minke Whale)

Protein Percentage 98.31%
cDNA percentage 99.21%
Ka/Ks Ratio 99.0 (Ka = 0.0103, Ks = 0.0001)

Additional orthologs identified in other species via the OPTIC pipeline.

RPAP2 (Cow)   RPAP2 (Human)   Rpap2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 888 bp    Location:80317..69942   Strand:-
Raw sequence 
>bmy_22001
ATGAAGAAGAAAGCTGGTCAAAAGGTTAACTCCAAACATGAAAGCAAAGAACAGACAGTAATAGATGTCACTGAGCAGTTAGGCAATTGCAGATTAGATAGTGAGGAGAAAGCTGCTGCTTGTGAACTTCCTTTACAGAATGTAAATACTCAGATTTCTTCAAATAGGTCTCCGCAAGAAAAATTAGAAGCTTCAAAAATTTCTGAAAATAAATACAATAGTTCAAAAATAACTCTTGTAGGCATAAGTAAGAAAAGTGCTGAGCATTTTAAGAGGAAATTTGCCAAATCGAACCAAGTTTCTAGGTCAGCTTCTAGTTCAGTGCAGGTGTGCCCTGAAGTTGCAAAGGCAAACTTACTTAAAGCGCTGAAGGAGACTTTGATTGAGTGGAAGACAGAAGAAACTTTGAGGTTTTTGTATGGCCAGAATTATGCTTCTGTATGTCTGAAACCCTCTTCAGCCCCTCTGGTTAAGGAAGAAGAACTTGATGAAGATGATGTGAACTGTGACCCAGACAGTCATTCCCCTGCCTTGCAGGAATCTCAGAACAGCTTGGATGAGTCTTTACCGTTTAGAGCCTCAGATACAGCCATTAAACCACTGCCAAGTTATGAGAACTTGAAAAAAGAAACTGAAACATTAAATCTAAGGATCAGGGAGTTTTATAGAGGACGATATGTTTTGAATGAAGAAACCGCCAAATCACAAGACTCAGAAGAGCATGATCCCACCTTTCCACTGATAGATTCACGTTCTCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAATTGAGTAAAGTATTGCCTGGACTTTTGGGGCCTCTTCAGATTACATTAGGAGATATTTACGCACAACTTAAAAATCTTGTCCGAACTTTCAGGAAC

Related Sequences

bmy_22001T0 Protein

Length: 296 aa      
>bmy_22001T0
MKKKAGQKVNSKHESKEQTVIDVTEQLGNCRLDSEEKAAACELPLQNVNTQISSNRSPQEKLEASKISENKYNSSKITLVGISKKSAEHFKRKFAKSNQVSRSASSSVQVCPEVAKANLLKALKETLIEWKTEETLRFLYGQNYASVCLKPSSAPLVKEEELDEDDVNCDPDSHSPALQESQNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGRYVLNEETAKSQDSEEHDPTFPLIDSRSQNQIRKRIVLEKLSKVLPGLLGPLQITLGDIYAQLKNLVRTFRN