Sequence details bmy_21948 (Coding sequence)

Part of scaffold_3433 (Scaffold)

For more information consult the page for scaffold_3433 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPBG ENSTTRG00000000227 (Bottlenosed dolphin)

Gene Details

trophoblast glycoprotein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000210, Bottlenosed dolphin)

Protein Percentage 97.11%
cDNA percentage 97.59%
Ka/Ks Ratio 0.15743 (Ka = 0.0122, Ks = 0.0772)

TPBG ENSBTAG00000039477 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054723, Cow)

Protein Percentage 90.21%
cDNA percentage 92.04%
Ka/Ks Ratio 0.14407 (Ka = 0.0442, Ks = 0.3065)

TPBG  (Minke Whale)

Gene Details

trophoblast glycoprotein

External Links

Gene match (Identifier: BACU000536, Minke Whale)

Protein Percentage 98.61%
cDNA percentage 98.51%
Ka/Ks Ratio 0.11101 (Ka = 0.0058, Ks = 0.0525)

Additional orthologs identified in other species via the OPTIC pipeline.

TPBG (Human)   Tpbg (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location:55909..57168   Strand:+
Raw sequence 
>bmy_21948
ATGCCTGGGGGGTGCTCCTGGGGCCCCGCCGCCGGGGACGGGAGGCTGCGGCTGGCACGGCTGGCGCTGGTCCTCCTGGGCTGGGTCTCCTCGTCCTCCCTCCCCTCCTCCGCGTCCTCCTCCACCTCCTCGGCGTTCCCGGTCTCCGCGGCGTCCGCCCAGCCCCAGCTGCCGGGCCGATGCCCCCCGGCGTGCGAGTGCTCCGAGGCGGCGCGCACCGTCAAGTGCGTGAACCGCAACCTGACCGAGGTGCCCGCGGACCTGCCCCCCTACGTGCGCAACCTCTTCCTCACCGGCAATCAGCTGGCCGTGCTCCCCGCCGGGGCCTTCGCCCGCCGGCCGCCGCTGGCCGAGCTGGCCGCGCTCAACCTCAGCGGCAGCCACCTGGAGGAGGTGCGCGCCGGCGCCTTCGAGCATCTGCCCAGCCTGCGCCAGCTCGACCTCAGCCACAACCCGCTGGCCGATCTCAGCCCCTTCGCCTTCTCGGGCGGCAACGCCAGCGTCGCGGCCCCCAGCCCCTTGGTGGAACTGCTCCTGAACCGCATGGTGCCCCCTGCGGCCGAGCTGCAGAACCGGAGCTTTGAGGGTACGGTGGCAGCGGCCCTGCGAGCGGGCCACGCGCTGCGCGGGCTCCGCCGCCTGGAGCTGGTCAGCAACCACCTCCTCTACCTGCCCCGCGACGTCCTGGCCCAGCTGCCCGGCCTCAGGCACCTGGACCTGCGCAACAACTCGCTGGTGAGCCTGACCTACGTGTCCTTCCGCAACCTGACACACCTCGAAAGCCTCCACCTGGAAAACAACGCCCTCAAGGTCCTGCACAACGGCACCCTGGCAGAGCTACAGAGCCTGCCCCACGTCAGGGTCTTCCTGGACGACAATCCCTGGGTCTGTGACTGCCACATGGCGGACATGGCGGCCTGGCTCAAGGAGACAGACGTAGTGCAGGGCAAAGCCAGGCTCACCTGTGCATTCCCGGAAAAAATGAGGAATCGGGTCCTCTTGGAACTCGACAGCTCCGACCTGGAATGTGACCCTATCCTTCCTCCATCCCTGCAGACGTCTTACGTCTTCCTGGGTATTGTTTTAGCCCTGATAGGCGCCATTTTCCTACTGGTTTTGTATTTGAACCGCAAAGGGATAAARAAGTGGATGCATAACATCAGAGATGCCTGCAGGGATCACATGGAAGGGTATCATTACAGATATGAAATCAATGCGGACCCCAGGTTAACAAACCTCAGTTCTAATTCGGATGTCTGA

Related Sequences

bmy_21948T0 Protein

Length: 420 aa      View alignments
>bmy_21948T0
MPGGCSWGPAAGDGRLRLARLALVLLGWVSSSSLPSSASSSTSSAFPVSAASAQPQLPGRCPPACECSEAARTVKCVNRNLTEVPADLPPYVRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSHLEEVRAGAFEHLPSLRQLDLSHNPLADLSPFAFSGGNASVAAPSPLVELLLNRMVPPAAELQNRSFEGTVAAALRAGHALRGLRRLELVSNHLLYLPRDVLAQLPGLRHLDLRNNSLVSLTYVSFRNLTHLESLHLENNALKVLHNGTLAELQSLPHVRVFLDDNPWVCDCHMADMAAWLKETDVVQGKARLTCAFPEKMRNRVLLELDSSDLECDPILPPSLQTSYVFLGIVLALIGAIFLLVLYLNRKGIKKWMHNIRDACRDHMEGYHYRYEINADPRLTNLSSNSDV*