Sequence details bmy_21903 (Coding sequence)

Part of scaffold_3364 (Scaffold)

For more information consult the page for scaffold_3364 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.42896 ENSBTAG00000013265 (Cow)

Gene Details

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042866, Cow)

Protein Percentage 95.76%
cDNA percentage 92.47%
Ka/Ks Ratio 0.07071 (Ka = 0.0237, Ks = 0.3356)

Additional orthologs identified in other species via the OPTIC pipeline.

DHX38 (Human)   Dhx38 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3849 bp    Location:60595..78357   Strand:+
Raw sequence 
>bmy_21903
ATGGAGGACACCAGCGAGGATGCCTCGATCCATCGATTGGAAGGCACTGAGGTGGACTCCCAGGTTGGCGGTCTTATTTTCAAGACCAAAAGTGCATCTAGTGAGCAGCATGTCTTCAAGGCCCCTGCTCCCCGCCCTTCATTGCTGGGACTAGACTTGTTGGCTTCCCTGAAAAGGAGGGAGAGAGAGGAGAAGGATGACGGGGAGGACAAGAAGAAGTCCAGAGTCTCTTCCTATAAGGACTGGGAAGAGAGCAAGGATGACCAGAGGGACGCTGAGGAGGAGGGCGGTGACCAGGCTGGCCGCAGTAGCCGAAAAGACAGACATTATCGATCTGCTCGGGTAGAGACTCCATCCCATCCTGGTGGTGTGAGTGAAGAGTTCTGGGAACGCAGTCGGCAGAGAGAGCGGGAGTGGCGGGAACATGGTGTCTACGCCTCGTCCAAAGAAGAAAAGGATCGGAAGAAGGAGAGGTCGAGGGATCGAGACTGTGACCGCAAGAGAGACAGAGATGAGCGGGATAGAAACAGGCACAGCAGCAGATCGGAGCGAGATGGAGGGTCAGAGCGCAGCGGCAGAAGAAACGAACCTGAGAGCCCCCGACACCGGCCTAAAGATGCAGCCACCCCTTCAAGGTCTACCTGGGATGAAGAGGACAGTGGCTATGGCTCCTCAAAGCGCTCACAGTGGGAATCGCCCTCCCCGACGCCTTCCTATCGGGATTCTGAGCGGAGTCATCGGCTGTCCAGTCGAGATAGGGACAGGTCTGTGAGGAGCAGGTACGCAGACGACACGCCTCTGCCAACCCCGTCCTACAAATACAACGAGTGGGCCGATGACAGAAGACATCTGGGGTCCACCCCACGTCTGTCCAGGGGCCGAGGGAGACGTGAGGATGGCGAAGAAGGAATTTCATTTGACACAGAAGAGGAACGGCAGCAATGGGAGGACGACCAGAGGCAAGCTGACCGGGATTGGTACATGATGGATGAGGGATATGATGAGTTCCACAACCCGCTGGCCTACTCCTCCGAGGACTACGTGAGGAGGCGGGAGCAGCATCTGCACAAACAGAAGCAGAAGCGCATTTCGGCCCAGCGGAGGCAGATCAATGAGGATAACGAACGCTGGGAGACCAACCGCATGCTCACCAGCGGGGTGGTGCATCGGCTGGAGGTGGACGACGACTTTGAAGAGGACAGTGCAGCCAAGGTCCATCTGATGGTGCATAACCTGGTGCCTCCCTTTCTGGACGGGCGCATCGTCTTCACCAAGCAGCCAGAGCCTGTGATTCCAGTCAAGGACGCCACTTCTGACCTGGCCATTATCGCTAGAAAAGGCAGTCAAACAGTGCGGAAGCACAGGGAGCAAAAGGAACGCAAAAAGGCTCAGCACAAACACTGGGAACTGGCTGGAACCAAACTGGGAGATATAATGGGCGTCAAAAAAGAGGAAGAGCCAGATAAAGCTCTGACAGAGGACGGTAAAGTGGACTACAGGGCAGAGCAGAAGTTTGCAGACCACATGAAGAAGAAGAGCGAAGCCAGCAGTGAATTCGCAAAGAAGAAGTCTATTCTGGAGCAGAGGCAGTACCTGCCCATCTTTGCTGTGCAGCAGGAGCTGCTCACGATTATCAGAGATAATAGCATCGTGATCGTGGTTGGGGAGACAGGGAGTGGTAAGACCACTCAGCTGACCCAGTACCTGCACGAAGACGGTTACACGGACTATGGGATGATCGGGTGCACCCAGCCCCGCCGTGTGGCTGCCATGTCGGTGGCCAAGAGAGTCAGTGAAGAGATGGGGGGCAGCCTTGGTGAGGAGGTGGGTTATGCCATCCGTTTCGAAGACTGCACTTCAGAAAGCACCTTGATCAAGTACATGACCGATGGAATCCTGCTGCGAGAGTCCCTGCGGGAAGCGGACCTGGATCACTACAGCGCCATCATCATGGACGAGGCCCATGAGCGCTCCCTCAACACCGACGTGCTCTTTGGGCTGCTCCGGGAGGTGGTGGCTCGGCGCTCAGACCTGAAGCTCATTGTCACGTCGGCCACCATGGATGCAGAGAAATTTGCTTCCTTTTTTGGGAATGTCCCCATCTTCCACATCCCTGGTCGTACCTTCCCTGTTGACATCCTCTTCAGCAAGACCCCCCAGGAGGATTATGTGGAGGCCGCAGTGAAGCAGTCTCTGCAGGTGCATCTGTCGGGGGCCCCCGGGGACATCCTTATCTTCATGCCTGGCCAAGAGGACATCGAGGTGACCTCAGACCAGATTGTGGAGCATCTGGAAGAACTGGAGAACGCGCCCGCCTTGGCTGTGCTGCCCATCTATTCCCAGCTGCCTTCTGACCTCCAGGCCAAAATCTTCCAGAAGGTGAGATGGGTCCCCACCTTGGGATTCCCCCAGACTCCCCGAAAGGAGGGCAAGAGGGAGGGTGTTAGTTTTCTGGCACGGGTGGGGTGTACTTTTCTCCTTGTGGGGTTTTTCCTACCTGAAGGCCTACAGCCTTCGCTCCATGAGTGTCCTGTCCGGCTCCAGGCTCCGGATGGCGTTCGGAAGTGTATCGTCGCCACCAACATTGCTGAGACCTCTCTGACTGTCGATGGCATCATGTTTGTTATCGATTCTGGTTATTGTAAATTAAAGGTCTTCAACCCCAGGATTGGCATGGATGCTCTGCAGATCTACCCCATCAGCCAGGCCAATGCCAACCAGAGGTCGGGGCGAGCCGGCAGGACGGGCCCAGGTCAGTGTTTCAGGCTCTACACCCAGAGCGCCTACAAGAACGAGCTCCTGACCACCACGGTGCCCGAGATCCAGCGGACCAACCTGGCCAACGTGGTGCTGCTGCTCAAGTCCCTGGGGGTGCAGGACCTGCTGCAGTTCCACTTCATGGACCCGCCCCCGGAGGACAACATGCTCAACTCCATGTATCAGCTCTGGATCCTCGGGGCCCTGGACAACACAGGCGGTCTGACCTCGACCGGGCGGCTGATGGTGGAGTTCCCGCTGGACCCGGCCCTGTCCAAGATGCTCATTGTGTCCTGTGACATGGGCTGCAGCTCCGAGATCCTGCTCATCGTCTCCATGCTGTCGGTCCCAGCCATCTTCTACAGGCCCAAGGGCCGAGAGGAGGAGAGCGATCAAATCCGGGAGAAGTTCGCAGTCCCTGAGAGCGACCACCTGACCTACCTGAATGTCTACCTGCAGTGGAAGAACAACAATTACTCTACCATCTGGTGTAACGATCATTTCATCCATGCCAAGGCCATGCGGAAGGTCCGGGAGGTGCGGGCTCAGCTCAAGGACATCATGGTGCAGCAGCGGATGAGCCTGGCCTCGTGTGGCACCGACTGGGACATTGTCAGGAAGTGTATCTGTGCTGCCTATTTCCACCAGGCAGCCAAGCTCAAGGGAATCGGGGAGTATGTGAATATCCGGACAGGCATGCCCTGCCACCTGCATCCCACCAGCTCCCTCTTTGGAATGGGCTACACCCCAGACTACATTGTGTATCAYGAGTTGGTCATGACCACCAAGGAGTACATGCAGTGTGTGACTGCTGTGGACGGAGAGTGGCTGGCAGAGCTGGGCCCCATGTTCTACAGCGTGAAGCAGGCAGGAAAGTCTCGGCAGGAGAACCGCCGACGGGCCAAAGAGGAAGCCTCTGCCATGGAGGAGGAGATGGCACTGGCTGAGGAGCAGCTGCGGGCCCGGCGGCAGGAGCAGGAAAAGCGCAGCCCCCTGGGTAGTGTCAGGTCTACAAAGATCTACACCCCAGGTCGGAAAGAGCAAGGGGAACCCATGACCCCTCGCCGCACACCAGCCCGCTTTGGGCTCTGA

Related Sequences

bmy_21903T0 Protein

Length: 1283 aa      
>bmy_21903T0
MEDTSEDASIHRLEGTEVDSQVGGLIFKTKSASSEQHVFKAPAPRPSLLGLDLLASLKRREREEKDDGEDKKKSRVSSYKDWEESKDDQRDAEEEGGDQAGRSSRKDRHYRSARVETPSHPGGVSEEFWERSRQREREWREHGVYASSKEEKDRKKERSRDRDCDRKRDRDERDRNRHSSRSERDGGSERSGRRNEPESPRHRPKDAATPSRSTWDEEDSGYGSSKRSQWESPSPTPSYRDSERSHRLSSRDRDRSVRSRYADDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDDDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKALTEDGKVDYRAEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGSLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKVRWVPTLGFPQTPRKEGKREGVSFLARVGCTFLLVGFFLPEGLQPSLHECPVRLQAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPRRTPARFGL*