Sequence details bmy_21865 (Coding sequence)

Part of scaffold_3329 (Scaffold)

For more information consult the page for scaffold_3329 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VAMP5  (Minke Whale)

Gene Details

vesicle-associated membrane protein 5

External Links

Gene match (Identifier: BACU005911, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.28%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0814)

Additional orthologs identified in other species via the OPTIC pipeline.

VAMP5 (Cow)   VAMP5 (Human)   Vamp5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 351 bp    Location:47275..40451   Strand:-
Raw sequence 
>bmy_21865
ATGGCAGGGAAAGAGTTGGAGCGGTGCCAGCGGCAGGCGGATGAGGTGACAGAAATCATGCTCAACAACTTCGACAAGGTCCTGGAGCGCGATGGAAAGCTGGCGGAGCTGGAACAGCGTTCAGACCAACTCCTGGACATGAGCTCCGCCTTCAGCAAGACAACCAAGACTCTGGCCCAGAAGAAGCGCTGGGAGAATGTCCGTTGCCGGATCTACTTGGGGCTGGTAGTAGGCGGTGGTCTGCTCATCCTCCTGATAGTGTTGCTGGCCATGTTTCTCCCACAAAGCAGCAAGGGCAGCAGTGCCCCACAGGCCCAGGATGCAGGCGCTGCCTCAGGGCCTGGGGAATGA

Related Sequences

bmy_21865T0 Protein

Length: 117 aa      
>bmy_21865T0
MAGKELERCQRQADEVTEIMLNNFDKVLERDGKLAELEQRSDQLLDMSSAFSKTTKTLAQKKRWENVRCRIYLGLVVGGGLLILLIVLLAMFLPQSSKGSSAPQAQDAGAASGPGE*