Part of scaffold_3070 (Scaffold)

For more information consult the page for scaffold_3070 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMEL1 ENSTTRG00000008709 (Bottlenosed dolphin)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008260, Bottlenosed dolphin)

Protein Percentage 63.98%
cDNA percentage 67.82%
Ka/Ks Ratio 0.29589 (Ka = 0.1187, Ks = 0.4012)

MMEL1 ENSBTAG00000009349 (Cow)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012307, Cow)

Protein Percentage 81.7%
cDNA percentage 84.63%
Ka/Ks Ratio 0.16995 (Ka = 0.1107, Ks = 0.6516)

MMEL1  (Minke Whale)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene match (Identifier: BACU001148, Minke Whale)

Protein Percentage 84.79%
cDNA percentage 88.0%
Ka/Ks Ratio 0.2276 (Ka = 0.0924, Ks = 0.406)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2238 bp    Location:72490..53946   Strand:-
>bmy_21561
AAGCAGCTGCCACTCTTTACTAGCCGGCTTTGCTTCTCAAAGGAAGAGAAGACCACTGTAAAACGAACACCCCGAGACATCCAAAAGCCCAAGGACACGGGCGAAACCTGCACCACCCCTGGCTGCGTGATGGCAGCCGCCAGGATCCTGCAGAACATGGACCCGTCCAAGGAGCCCTGTGACGACTTCTACCAGTACGCGTGCGGGGGCTGGCTGCGGCGCCACGTGGTCCCCGAGACCAACTCGCGATACAGCGTCTTCGACATCCTCCGGGATGAGCTGGAGATCATTCTCAAAGGTGAGCGCGGCCTCCACCGCAGGAGTGGGGACAGCCCGTCGAGCCAGGCATCGGGTGAGCGACCGCTCCCTCCCCTCTCAGGTGAGATAGAAAAGCGAGACTCGAAGCCCCTGCTGGACATCCTGGAGGTGGTAGGAGGCTGGCCAGTGGCCATGGACAAGTGGAGTGAGAGCATAGGCCCCCAGTGGGAGCTGGAACAGCAGCTGGCCGTGATGAACACGCGGTTCAACCGGCGGGTCCTCATCGACCTCTTCATCTGGAACGACGACCAGGACTCCAGCCAGCACATCATCTACATAGACCAGCCCACCCTGGGCATGCCGTCCCGAGAGCACTACTTCAGTGCGGGCAGCGACCAGAAGGTACGGGAAGCCTACTTGCAGCTCATGGTGTCGGTGGCCACGATGCTTCGGGCGGACATGAACCTCCCCAAGAACAGCGACCTGGTGCGGGAGGACATGGCGCGGGTGCTGGAGCTGGAGACGCAGCTGGCCAACGCCACGGCCCCCCCGGAGGAGCGGCACGACGTCACCGCCCTGTACCACAGGATGGACCTGGAGCAGCTCCAGAGCAAGTTCGGTCTGAAGGGATTTAACTGGACTCTCTTCATACAATCTGTGCTATCCTCTGTCAAAATCGAGCTGCTGCCAGACGAGGAAGTGGTGGTCTACGGCATCCCCTACCTCCAGAATCTTGAAGACATCATCGATGTCTACTCATCCAGGACCATGCAGAACTACCTGGTCTGGCGCCTGGTGCTGGACCGCATCAGCAGCCTGAGCCAGAGATTCACGGATGCACGCGCAAACTACCGCAAGGCGCTGTACGGCACGACGGTAGAGGAGGTGCGCTGGCGGGAGTGCGTCAGCTACGTCAACAGTAACATGGAGAGCGCCGTGGGCTCACTCTACGTCAAGGAGGCCTTCCCCGGGGACAGCAAGAAGGTGGTCGGAGAGCTCATCGACAAGCTGCGGGCAGTGTTCGTGGAGACCCTGGACGAGCTGAGCTGGATGGATGAGTCATCCAAGAAGAAGGCCCAGGAGAAGGCCATGAGCATCCGGGAGCAGATTGGGTATCCCGACTACATCCTGGAGGAGGGGAACAAGCACCTGGACGAGGAGTACTCCAATCTGAACTTCTCGGAGCACCTGTACTTTGAGAACGGACTGCAGAATCTCAAGGCTGGCGCCCAGCGGAGCCTCAAGAAGCTTCGGGAGAAGGTGGACCAAAACCTCAAGGAGCAGCCACAGGCCTTGAACTTTGGGGGCATCGGGATGGTGATTGGGCACGAGATCACCCATGGCTTTGATGACAACGGCCGGAACTTCGACAAGAATGGCAACATGATGGACTGGTGGAGTAACTTCTCGGCCCAGCACTTCCGCAAGCGGTCGGAATGCATGGTCTACCAGTATGGCAACTACTCCTGGGACCTGGCCGACGACCAGAACGTCAATGGCTTCAGTACCCTCGGGGAAAACATCGCAGACAATGGAGGGGTGCGGCAGGCCTACAAGGCTTACCTGAAGTGGGTGGCGGAAGGCGGCAAGGACCAGCAGCTGCCGGGACTGGAGCTGACCTATGAGCAGCTGTTCTTCATCAGCTACGCACAGGTGCGAGGTGCTGGGCTCGCTGCAGAACCTGGCCGCCTTCGCGGACGCGTTCCACTGTGCGCGGGGCTCCCCCATGCACCCGAAGGTGCGATGCCGCGTCTGGTAGCCAAGGCCGAGCCGCGCTGCGCGGCCCACGCCCACTCGCCGACCCGAGGTGTCCCGTCCGCTCGGAGACGGTGCTGCCAGCGGGGACCGGCGTGCGCCCCGCTCCCGGCGGCCGACCCACCCGCGCCGCGCCCAGCCTCCGTGCCCGGCCTGGAGCGCGACCCGGCCCTGAGCCCGCTCCGCGCCTGCCCGCGAGGGTCTACACCGCCCACCGCAGCCCTG

Related Sequences

bmy_21561T0 Protein

Length: 746 aa      View alignments
>bmy_21561T0
KQLPLFTSRLCFSKEEKTTVKRTPRDIQKPKDTGETCTTPGCVMAAARILQNMDPSKEPCDDFYQYACGGWLRRHVVPETNSRYSVFDILRDELEIILKGERGLHRRSGDSPSSQASGERPLPPLSGEIEKRDSKPLLDILEVVGGWPVAMDKWSESIGPQWELEQQLAVMNTRFNRRVLIDLFIWNDDQDSSQHIIYIDQPTLGMPSREHYFSAGSDQKVREAYLQLMVSVATMLRADMNLPKNSDLVREDMARVLELETQLANATAPPEERHDVTALYHRMDLEQLQSKFGLKGFNWTLFIQSVLSSVKIELLPDEEVVVYGIPYLQNLEDIIDVYSSRTMQNYLVWRLVLDRISSLSQRFTDARANYRKALYGTTVEEVRWRECVSYVNSNMESAVGSLYVKEAFPGDSKKVVGELIDKLRAVFVETLDELSWMDESSKKKAQEKAMSIREQIGYPDYILEEGNKHLDEEYSNLNFSEHLYFENGLQNLKAGAQRSLKKLREKVDQNLKEQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMMDWWSNFSAQHFRKRSECMVYQYGNYSWDLADDQNVNGFSTLGENIADNGGVRQAYKAYLKWVAEGGKDQQLPGLELTYEQLFFISYAQVRGAGLAAEPGRLRGRVPLCAGLPHAPEGAMPRLVAKAEPRCAAHAHSPTRGVPSARRRCCQRGPACAPLPAADPPAPRPASVPGLERDPALSPLRACPRGSTPPTAAL