Part of scaffold_2602 (Scaffold)

For more information consult the page for scaffold_2602 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMOD1 ENSTTRG00000000502 (Bottlenosed dolphin)

Gene Details

tropomodulin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000471, Bottlenosed dolphin)

Protein Percentage 90.69%
cDNA percentage 90.49%
Ka/Ks Ratio 0.10788 (Ka = 0.0059, Ks = 0.0545)

BT.101239 ENSBTAG00000014719 (Cow)

Gene Details

Tropomodulin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019585, Cow)

Protein Percentage 92.17%
cDNA percentage 90.56%
Ka/Ks Ratio 0.15948 (Ka = 0.0508, Ks = 0.3188)

TMOD1  (Minke Whale)

Gene Details

tropomodulin 1

External Links

Gene match (Identifier: BACU017560, Minke Whale)

Protein Percentage 92.65%
cDNA percentage 94.36%
Ka/Ks Ratio 0.52499 (Ka = 0.0492, Ks = 0.0937)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1002 bp    Location:94882..154632   Strand:+
>bmy_20756
ATGTCGTACAGACGAGAACTAGAGAAATACCGTGACCTGGATGAAGATGAAATCCTTGGAGCCCTAACAGAAGAAGAGCTGAGGACCCTGGAAAATGAGCTGGATGAGCTGGACCCCGATGGTGTTAGAGCTCCTAACAACACAGTTGAGGATTTGTCAGTTTCCATTGTCCTGTGGGCAGCTGGACTCCAGAGCTTGCGAAAAGTCTGGGTCCCCAAGCAGAAGCCGATGGACCCTGTGCTGGAAAGTGTGACACTGGAGCCGGAGCTGGAGGAGGCCCTGGCAAATGCCTCGGATGCGGAACTCTGTGACATCGCAGCTATCCTGGGCATGCACACGCTCATGAGCAACCAGCAGTACTACCAGGCCTTGGGCAGCAGCTCCATCGTGAACAAGGAGGGACTCAACAGTGTGATCAAACCTACACAATACAAGCCTGTGCCTGATGAAGAACCAAATGCAACAGACTTGGAGGAAACGCTGGAGCGGATAAAGAGCAACGACCCAAAACTTGAAGAGGTCAACCTCAACAACATCCGGAATATCCCCATACCCACTCTCAAGGTGTATGCAGAAGCCCTGAAAGAGAACTCGTATGTGAAGAAGTTCAGCATCGTGGGGACACGGAGCAATGACCCCGTGGCATTTGCCCTTGCTGAGATGCTCAAGGTGAACAAGGTGTTGAAGACACTGAACGTGGAATCCAACTTCATTTCCGGAGCCGGGATCCTGCGCCTGGTGGAAGCTCTTCCATACAACACTTCTCTGGTGGAACTGAAGATCGATAACCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGGAGATCGTGAGCATGTTGGAAAAAAATGCAACACTTCTCAGATTCGGCTACCACTTCACTCAGCAGGGGCCCCGGCTGCGGGCGTCCAACGCGATGATGAACAACAACGACCTTGTGAGGAAGAGGAGGCTGGCCGACTTGACCGGGCCCATCATTCCCAAGTGCCGGAGTGGCATCTAG

Related Sequences

bmy_20756T0 Protein

Length: 334 aa      View alignments
>bmy_20756T0
MSYRRELEKYRDLDEDEILGALTEEELRTLENELDELDPDGVRAPNNTVEDLSVSIVLWAAGLQSLRKVWVPKQKPMDPVLESVTLEPELEEALANASDAELCDIAAILGMHTLMSNQQYYQALGSSSIVNKEGLNSVIKPTQYKPVPDEEPNATDLEETLERIKSNDPKLEEVNLNNIRNIPIPTLKVYAEALKENSYVKKFSIVGTRSNDPVAFALAEMLKVNKVLKTLNVESNFISGAGILRLVEALPYNTSLVELKIDNQSQPLGNKVEMEIVSMLEKNATLLRFGYHFTQQGPRLRASNAMMNNNDLVRKRRLADLTGPIIPKCRSGI*