Sequence details bmy_20680 (Coding sequence)

Part of scaffold_2585 (Scaffold)

For more information consult the page for scaffold_2585 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP35 ENSTTRG00000002512 (Bottlenosed dolphin)

Gene Details

nucleoporin 35kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002355, Bottlenosed dolphin)

Protein Percentage 82.2%
cDNA percentage 84.47%
Ka/Ks Ratio 0.51804 (Ka = 0.1494, Ks = 0.2884)

NUP35 ENSBTAG00000009777 (Cow)

Gene Details

nucleoporin NUP53

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012896, Cow)

Protein Percentage 98.43%
cDNA percentage 95.11%
Ka/Ks Ratio 0.03337 (Ka = 0.0071, Ks = 0.214)

Genome Location

Sequence Coding sequence

Length: 576 bp    Location:40183..32580   Strand:-
Raw sequence 
>bmy_20680
ATGTTTAGTCCAGCAAACATTGGTCAACCACGAAAGACAACATTATCTCCTGCCCAGTTGGATCCTTTTTATACTCAAGGAGATTCTTTGACATCTGAAGATCACCTCGATGACACTTGGGTGACTGTGTTCGGGTTTCCTCAAGCATCTGCTTCCTATATATTATTACAATTTGCACAGTATGGAAATATCTTAAAACATGTGATGTCTAACACAGGAAATTGGATGCATATTCGTTATCAATCTAAACTGCAGGCCCGGAAAGCTTTAAGCAAAGATGGGAGAATTTTTGGAGAGTCCATCATGATTGGTGTAAAACCATGTATAGATAAAAGCGTTATGGAAAACAGTGACAGGTGTGCTTTATCATCTCCATCTGTTGCCTTTACACCACCAATCAAAACCTTAGGTACACCAACCCAACCTGGAAGTACTCCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACAAAGCTTCTACTAGTGACTATCAGGTTATTTCTGATAGACAAACGCCAAAAAAAGATGAAAGTCTTGTATCCAAAGCAATGGAATACATGTTTGGCTGGTAA

Related Sequences

bmy_20680T0 Protein

Length: 192 aa      View alignments
>bmy_20680T0
MFSPANIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMENSDRCALSSPSVAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQTPKKDESLVSKAMEYMFGW*