Part of scaffold_2545 (Scaffold)

For more information consult the page for scaffold_2545 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCMTD1 ENSTTRG00000007943 (Bottlenosed dolphin)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007518, Bottlenosed dolphin)

Protein Percentage 91.67%
cDNA percentage 92.04%
Ka/Ks Ratio 0.17485 (Ka = 0.0435, Ks = 0.2486)

PCMTD1 ENSBTAG00000017492 (Cow)

Gene Details

Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023247, Cow)

Protein Percentage 96.11%
cDNA percentage 90.0%
Ka/Ks Ratio 0.03559 (Ka = 0.0177, Ks = 0.4976)

PCMTD1  (Minke Whale)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1

External Links

Gene match (Identifier: BACU002345, Minke Whale)

Protein Percentage 90.0%
cDNA percentage 92.41%
Ka/Ks Ratio 0.35218 (Ka = 0.0587, Ks = 0.1668)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 543 bp    Location:183465..194242   Strand:+
>bmy_20594
ATGAAGATCCTGCTGAAGGTCGGGGGCATCCTCGTGATGCCTATAGAAGACCAGTTAACACAAATTATGCGAACTGGACAAAACACTTGGGAAAGTAAAAACATCCTTGCTGTGTCATTTGCCCCACTTGTGCAGCCGAGCAAGAATGACAATGGCAAACCAGATTCTGTGGGCCTCCCCCCCTGTGCTGTCAGGAATCTGCAGGACTTGGCTCGTATTTACATTCGACGCACACTTAGAAATTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCTCAGAGGGCTCCGCCCAAAAGGAAAAGGAAGAGGGTCAAGCAGAGGATTAACACTTACGTCTTTGTGGGGAATCAGCTCATTCCTCAGCCTCTAGACAGTGAGGAGGATGAGAAGATGGAAGAAGATGAAGAGGGGGAGGAGAGAGAGCGCGGCGACGCCCAGAAGCTGGAGGAGCCGCCCCAGAACCTGCTGAGGGAGAAGATCATGAAGCTCCCCCTGCCCGAGTCTTTGAAAGCTTACTTGACATATTTTCGGGAAAAATAA

Related Sequences

bmy_20594T0 Protein

Length: 181 aa      View alignments
>bmy_20594T0
MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDEEGEERERGDAQKLEEPPQNLLREKIMKLPLPESLKAYLTYFREK*