Sequence details bmy_20539 (Coding sequence)

Part of scaffold_2528 (Scaffold)

For more information consult the page for scaffold_2528 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PUS1 ENSTTRG00000000632 (Bottlenosed dolphin)

Gene Details

pseudouridylate synthase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000593, Bottlenosed dolphin)

Protein Percentage 94.54%
cDNA percentage 95.72%
Ka/Ks Ratio 0.14904 (Ka = 0.0259, Ks = 0.1739)

PUS1 ENSBTAG00000012990 (Cow)

Gene Details

Pseudouridine synthase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017270, Cow)

Protein Percentage 92.59%
cDNA percentage 92.67%
Ka/Ks Ratio 0.07244 (Ka = 0.0313, Ks = 0.4326)

Additional orthologs identified in other species via the OPTIC pipeline.

PUS1 (Human)   Pus1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1299 bp    Location:140282..127889   Strand:-
Raw sequence 
>bmy_20539
ATGGGGCTCCCCAGCCTGCGGGCGGCGGCCTGGGCCCTGAGGAGAGCCTGTGGACCGTGGACCCCGCGCCTGGGACCGCGCCTCCTCTGTTTGCCCCCCATGGCAGGGAATGGGGAGGCCCCCGTGCCCGTGGGGACGCAGCAGGAGCAGGACAGGAAGGCACGGCGTGGCTGGCAGGGCACGGCCGGGATCTGGGAGGAAACAGAGCGGCAGGCGAAGAAGCTCAAGAGCAGCGAGGACGGGGAGCACCGGAAGCTGCCCAAGCGGAAGGTGGTGCTGCTCGTGGCCTATTCCGGGAAGGGCTACCACGGCATGCAGAGGAATGTTGGGTCCTCGAAATTCAAGACCATCGAAGATGACCTGGTGTCCGCCCTGGTCCGGTCGGGTTGTATTCCTGAGAATCACGGGGAGGACATGCGGAAGATGTCCTTCCAGCGCTGCGCCCGGACGGACAAGGGTGTGTCTGCGGCCGGCCAGGTTGTGTCCCTGAAGGTGTGGCTGATTGACGACCTTTTAGAAAAGATTAACAGCCACCTTCCGTCTCACATTCGGATACTGGGACTGAAGAGGGTCACGGGCGGCTTCAACTCCAAGAACAAGTGCGACGCCAGGACCTACTTCTACATGCTGCCCACGTTCGCCTTCGCCCACAAGGACCACGACGCGCAGGACGAGACGTACCGGCTGCAGGCAGAGACGCTGGGGCGTGTGAACCGGCTCCTGGCCTGCTACAGGGGCACCCACAACTTCCACAACTTCACCTCGCAGAAGGGGCCCCGCGAGCCCAGCGCCCGGCGCTACATCCTCGACATGTTCTGCGAGGAGCCCTTCGTGCGCGAAGGCATGGAGTTTGCGGTGATCAAGGTCAAGGGCCAGAGCTTCATGACGCACCAGATCAGGAAGATGGTGGGGCTGGTGGTGGCCATCGTCAAGGGCTACGCGCCCGAGAGCGTGCTGGAGCGCTGTTGGGGGGAGGCCAAGGTGGACGTGCCCAAGGCGCCGGGGCTCGGCCTGGTCCTGGAGCGGGTGCACTTCGAGAAGTACAACCAGCGCTTCGGCCACGACGGGCTGCACGAGCCGCTGGACTGGGCGCGGGAGGAGGCTGAGGCCGCGGCCTTCAAGGAGCAGCACATCTACCCCACGATCGTCAGCACCGAGCGCCACGAGAGGTCCATGGCCCAGTGGCTGAGCACCCTGCCTGTGCACGACTTCAGCGCCACTGCCCACGCGGCCGCCGGCCCGGGCACCAAGGTCCCCCGCGCCCTGGAAGGCAGTGACGGGGACGGGGGCAGTGACTGA

Related Sequences

bmy_20539T0 Protein

Length: 433 aa      View alignments
>bmy_20539T0
MGLPSLRAAAWALRRACGPWTPRLGPRLLCLPPMAGNGEAPVPVGTQQEQDRKARRGWQGTAGIWEETERQAKKLKSSEDGEHRKLPKRKVVLLVAYSGKGYHGMQRNVGSSKFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDLLEKINSHLPSHIRILGLKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDAQDETYRLQAETLGRVNRLLACYRGTHNFHNFTSQKGPREPSARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQIRKMVGLVVAIVKGYAPESVLERCWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGHDGLHEPLDWAREEAEAAAFKEQHIYPTIVSTERHERSMAQWLSTLPVHDFSATAHAAAGPGTKVPRALEGSDGDGGSD*