Sequence details bmy_19948 (Coding sequence)

Part of scaffold_2268 (Scaffold)

For more information consult the page for scaffold_2268 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB12 ENSTTRG00000008711 (Bottlenosed dolphin)

Gene Details

RAB12, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008257, Bottlenosed dolphin)

Protein Percentage 98.92%
cDNA percentage 98.21%
Ka/Ks Ratio 0.06539 (Ka = 0.0046, Ks = 0.0706)

RAB12 ENSBTAG00000010356 (Cow)

Gene Details

ras-related protein Rab-12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013671, Cow)

Protein Percentage 99.41%
cDNA percentage 93.29%
Ka/Ks Ratio 0.00796 (Ka = 0.0027, Ks = 0.3337)

Additional orthologs identified in other species via the OPTIC pipeline.

RAB12 (Human)   Rab12 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 561 bp    Location:11662..34957   Strand:+
Raw sequence 
>bmy_19948
ATGGAGCGCTTTACCGACGACACCTTCTGCGAAGCCTGCAAGTCCACCGTGGGTGTTGACTTTAAAATCAAAACCGTAGAGCTAAGAGGAAAGAAAATTAGGTTACAGATCTGGGACACAGCAGGTCAGGAGAGATTCAACAGCATTACCTCAGCTTATTACAGAAGTGCCAAGGGGATCATATTAGTATATGATATCACTAAGAAGGAGACATTTGATGATTTGCCAAAATGGATGAAGATGATTGATAAGTATGCTTCAGAAGACGCAGAGCTTCTTTTAGTTGGAAATAAGTTGGACTGTGAAACTGACAGAGAAATCAGCAGACAACAAGGTGAAAAGTTTGCACAGCAGATAACTGGGATGCGGTTCTGTGAAGCAAGTGCCAAGGATAACTTCAACGTGGACGAAATATTCCTGAAGCTTGTCGATGACATCCTGAAAAAGATGCCTCTGGACATGCTAAGGAACGAGCTGTCCAATAGCATCCTCTCCTTACAACCAGAGCCTGAGATCCCACCAGAACTGCCTCCACCCAGACCACACGTCCGATGCTGTTGA

Related Sequences

bmy_19948T0 Protein

Length: 187 aa      View alignments
>bmy_19948T0
MERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDMLRNELSNSILSLQPEPEIPPELPPPRPHVRCC*