Part of scaffold_2100 (Scaffold)

For more information consult the page for scaffold_2100 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM49A ENSTTRG00000014636 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 49, member A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013878, Bottlenosed dolphin)

Protein Percentage 99.38%
cDNA percentage 98.14%
Ka/Ks Ratio 0.03137 (Ka = 0.0026, Ks = 0.083)

FAM49A ENSBTAG00000012779 (Cow)

Gene Details

Protein FAM49A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016983, Cow)

Protein Percentage 99.69%
cDNA percentage 94.84%
Ka/Ks Ratio 0.0055 (Ka = 0.0014, Ks = 0.249)

FAM49A  (Minke Whale)

Gene Details

family with sequence similarity 49, member A

External Links

Gene match (Identifier: BACU010272, Minke Whale)

Protein Percentage 97.33%
cDNA percentage 97.53%
Ka/Ks Ratio 0.29761 (Ka = 0.0162, Ks = 0.0544)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1047 bp    Location:1450..61974   Strand:+
>bmy_19485
ATGACTCATCTGGCCTCAACTACAGCCAAGAGGTTTGCTGGGATGGGAAACCTGCTCAAAGTCCTTACCAGGGAAATTGAAAACTACCCACACTTTTTCCTGGATTTTGAAACCCTCTGTGTCTTTTGGTTTCCCATCTGCTTAGATGCCCAGCCCACAGAAGGAGAGAGGGAAATATGGAACCAGATCAGCGCCGTCCTCCAGGATTCCGAGAGCATCCTCGCAGACCTGCAGGCTTACAAGGGCGCGGGCCCAGAGATCCGAGACGCCATTCAAAATCCCAATGACATTCAGCTTCAAGAAAAAGCTTGGAATGCAGTGTGTCCTTTGGTCGTGAGGCTAAAGAGATTTTATGAGTTTTCTATCAGGCTAGAAAAAGCTCTTCAGAGTTTATTGGAATCTCTGACCTGTCCGCCCTACACACCAACCCAACACCTGGAGAGGGAGCAGGCCCTGGCAAAGGAGTTTGCGGAAATTCTACATTTCACCCTTCGATTTGATGAGCTAAAGATGAGGAACCCGGCTATTCAGAATGACTTCAGCTACTACAGAAGGACCATCAGTCGTAACCGCATCAACAACATGCATCTAGACATTGAGAACGAAGTCAACAATGAGATGGCCAACCGAATGTCCCTCTTCTATGCAGAAGCCACGCCGATGTTGAAAACCCTCAGCAACGCCACCATGCACTTTGTCTCCGAAAACAAAACGCTGCCAATAGAGAATACCACAGACTGCCTCAGTACGATGACGAGCGTTTGTAAAGTCATGCTGGAAACTCCGGAGTACAGGAGTAGGTTTACAAGYGAAGAAACGCTGATGTTCTGCATGAGGGTGATGGTGGGGGTCATCATCCTCTACGACCACGTCCACCCCGTGGGAGCTTTCTGCAAGACGTCCAAGATCGATATGAAAGGCTGTATAAAGGTGTTGAAGGAACAGGCCCCAGACAGTGTGGAGGGGCTGCTGAACGCCCTCAGGTTCACTACAAAACACTTGAATGATGAATCGACTTCCAAACAGATTCGAGCAATGCTTCAGTAA

Related Sequences

bmy_19485T0 Protein

Length: 349 aa      View alignments
>bmy_19485T0
MTHLASTTAKRFAGMGNLLKVLTREIENYPHFFLDFETLCVFWFPICLDAQPTEGEREIWNQISAVLQDSESILADLQAYKGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPYTPTQHLEREQALAKEFAEILHFTLRFDELKMRNPAIQNDFSYYRRTISRNRINNMHLDIENEVNNEMANRMSLFYAEATPMLKTLSNATMHFVSENKTLPIENTTDCLSTMTSVCKVMLETPEYRSRFTSEETLMFCMRVMVGVIILYDHVHPVGAFCKTSKIDMKGCIKVLKEQAPDSVEGLLNALRFTTKHLNDESTSKQIRAMLQ*