Sequence details bmy_19484 (Coding sequence)

Part of scaffold_2087 (Scaffold)

For more information consult the page for scaffold_2087 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPBP1 ENSTTRG00000004344 (Bottlenosed dolphin)

Gene Details

GC-rich promoter binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004086, Bottlenosed dolphin)

Protein Percentage 99.28%
cDNA percentage 99.12%
Ka/Ks Ratio 0.1399 (Ka = 0.0033, Ks = 0.0238)

GPBP1 ENSBTAG00000012124 (Cow)

Gene Details

Vasculin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016085, Cow)

Protein Percentage 98.45%
cDNA percentage 96.83%
Ka/Ks Ratio 0.05374 (Ka = 0.0068, Ks = 0.1264)

Additional orthologs identified in other species via the OPTIC pipeline.

GPBP1 (Human)   Gpbp1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1359 bp    Location:124614..152116   Strand:+
Raw sequence 
>bmy_19484
TCGTCACTGAATTTTGAAAAGCATTCTGAAAACTTTTCATGGACAGAAAATCGTTATGATGTGAATCGTCGACGACACAACTCTTCAGATGGCTTTGATTCTGGAATTGGACGTCCTAATGGAGGTAACTTTGGAAGGAAAGAAAAAAATGGATGGCGTACACATGGAAGAAATGGTACTGAAAACATAAATCATCGAGGGGGATACCATGGTGGAAGTTCCCGTTCTCGTAGCAGTATTTTCCATTCTGGAAAAAGCCAAGGCCTACATGAAAACAGCATACCTGACAGTGAAACGGGGAGGAAAGAAGACAAGAGAGAACGCAAACAGTTTGAGGCTGAGGATTTTCCATCTTTAAATCCTGAGTATGAGAGAGAACCAAATCAGAATAAATCTTTAGCTGCAGGTGTATGGGAATATCCCCCGAATCCTAAATCTAGAACTCAAAGGATGCTGGTCATTAAGAAAGGTAATACAAAAGACTTACAGCTATCTGGATTCCCAGTAGTAGGAAATCTTCAGTCACAGCCAGTTAAGAATGGGACTGGTCCAAGTGTTTATAAAGGCTTAGTCCCTAAGCCTGCCGCTCCACCTACAAAACCTACACAGTGGAAAAGCCAAACTAAAGAAAATAAAGTTGGGACTTCTTTCCCTCATGAGTCTGCATATGGTGTCGGAAACTTTAATGCTTTTAAATCAACTGCCAAGAATTTTAGTCCATCAGCAACTTCAGTGAAAGAGTGTAATCGCTCAAATTCCTCTTCACCTGTTGACAAACTTAATCAGCAGCCTCGTCTAACCAAACTGACACGTATGCGCACTGATAAGAAGAGTGAATTTTTGAAAGCATTGAAAAGGGACAGAGTAGAAGAGGAACATGAAGATGAAAGCCATGCGGGCTCAGAAAAGGATGACGACTCATTTAATTTGCATAACAGCAATAGTACTCACCAAGAAAGGGATATAAACCGAAACTTTGATGAAAACGAAATTCCACAAGAGAATGGCAATGCCTCGGTAATTTCCCAACAGATCATTCGGTCTTCAACCTTCCCACAAACTGATGTTCTTTCTAGTTCACTGGAAGCAGAACACAGATTGTTAAAGGAGATGGGCTGGCAAGAAGACAGTGAAAATGATGAAACATGTGCTCCCTTAACTGAGGATGAAATGAGAGAATTCCAGGTTATTAGTGAACAGTTACAGAAGAACGGTCTGAGGAAAAATGGTATTTTGAAAAATGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGAAAAACAGCACTTTCAAACCCACTATTGAGAATGATGACACAGAGACAAGTAGCAGTGACACATCAGATGACGACGATGTGTGA

Related Sequences

bmy_19484T0 Protein

Length: 453 aa      View alignments
>bmy_19484T0
SSLNFEKHSENFSWTENRYDVNRRRHNSSDGFDSGIGRPNGGNFGRKEKNGWRTHGRNGTENINHRGGYHGGSSRSRSSIFHSGKSQGLHENSIPDSETGRKEDKRERKQFEAEDFPSLNPEYEREPNQNKSLAAGVWEYPPNPKSRTQRMLVIKKGNTKDLQLSGFPVVGNLQSQPVKNGTGPSVYKGLVPKPAAPPTKPTQWKSQTKENKVGTSFPHESAYGVGNFNAFKSTAKNFSPSATSVKECNRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESHAGSEKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNSTFKPTIENDDTETSSSDTSDDDDV*