Sequence details bmy_19254 (Coding sequence)

Part of scaffold_1977 (Scaffold)

For more information consult the page for scaffold_1977 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLFNL1 ENSTTRG00000010569 (Bottlenosed dolphin)

Gene Details

schlafen-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010019, Bottlenosed dolphin)

Protein Percentage 94.33%
cDNA percentage 96.22%
Ka/Ks Ratio 0.14746 (Ka = 0.0238, Ks = 0.1611)

SLFNL1 ENSBTAG00000001628 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030528, Cow)

Protein Percentage 82.6%
cDNA percentage 87.97%
Ka/Ks Ratio 0.15397 (Ka = 0.086, Ks = 0.5587)

SLFNL1  (Minke Whale)

Gene Details

schlafen-like 1

External Links

Gene match (Identifier: BACU019731, Minke Whale)

Protein Percentage 97.21%
cDNA percentage 97.72%
Ka/Ks Ratio 0.20202 (Ka = 0.0152, Ks = 0.0753)

Additional orthologs identified in other species via the OPTIC pipeline.

SLFNL1 (Human)   Slfnl1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1236 bp    Location:287500..284176   Strand:-
Raw sequence 
>bmy_19254
ATGGAGCCCCCAGGCAAGCAGCCCCTGCAGGAGCTCCCCGCAGAAGAGTCCATGTCTGAGGACTCAAGTACCGAGGCGGCTCCCAGCAGGCATGTTCTCTACGTGGGCCACCTGAACCCCCAGTTCTCAGTGCCCGTGCTCGCCTGCCTGCTGCGAGACGCCCTGGAGCGGCTGGAGCTGCCGGTGGCGCGGGAGCACATCCAGGTGGTAAGGCAGCCACGCAGGGCCTACGCGCTGGTGCAGGTGGCCGCCCACGAGGACACCCTGGCCTCCCTGCCCTGGCGCCTACACACGGCCTTGGAGGAGCACCAGATCATCAAGGAGCTGGTGGCCCCCGGGAAGGAGCTGGTGCTGGGTGAGGGCCGGGAGCCCTCAAACCGCAGAGAGGTAAGCGAGGCTTTCCCTGAGCCAGGCGGCCCTCCAGCCGCCGAGCCTCACTCGCGGGAGGCCTGGCAGGAGGAGGACAGCGGCCCGAGCCCCAGCCTCAGCCCTGGCCCCATCCTGGGCTCCAGCCCCCCGCCGGCCTGGCTCGCCGGACCCCTTCCTACCCAGGCCCCCACCCCACGGCGGGACTACCCGGGCCGGCCCAGTGGCACGCGTTCAGACAGCGCCATCGTGCACCAGGAGATCCTGGGCCAGGAGCGCCTCTTCCAGGGCGCCTTCCTGGGCAGCGAGACACGCAACGTGGAGTTCAAGAGGGGCGGCGGCGAGTACCTGAGCCAGGCCTTCAAGCACCACCTGCGTCGCTACGTGTGCGCCTTCCTCAACAGCGAGGGCGGCAGCCTGCTGGTGGGCGTGGAGGACAGTGGCCTGGTGCAGGGCATCCGCTGCAGCCACCGCGACGAGGACCGTGTGCGCCTGCTGGTGGACTCCATCCTGCAGGGCTTCAAGCCCCAGGTCTTCCCCGACGCCTACAAGCTCACCTTCATCCCCGTGGTCAGCACCTCTGCCACCGGCACCCCCCTCAAGGTGATCCGCCTGAGCGTGCACGCCCCCAAGGCCCAGGCCCAGCCGCAGCTCTACGAGACGGACCAGGGGGAGGTGTTCCTGCGGCGGGATGGGAGCATCCAGGGCCCCCTGTCCGTACGCGCCATCCAGGAGTGGGGCAGGCAGAAGTGGACGGCCGAGCTGAGCAAGCTGGAGGAGAGGCTGCGGGTGCTGACGGCCGAGAAGGAGCAGCTCCAGCAGCAGCTGCGGCGGTACAAGCCCGTCTCCTGCACCTGCTGCGTCCTGTGA

Related Sequences

bmy_19254T0 Protein

Length: 412 aa      View alignments
>bmy_19254T0
MEPPGKQPLQELPAEESMSEDSSTEAAPSRHVLYVGHLNPQFSVPVLACLLRDALERLELPVAREHIQVVRQPRRAYALVQVAAHEDTLASLPWRLHTALEEHQIIKELVAPGKELVLGEGREPSNRREVSEAFPEPGGPPAAEPHSREAWQEEDSGPSPSLSPGPILGSSPPPAWLAGPLPTQAPTPRRDYPGRPSGTRSDSAIVHQEILGQERLFQGAFLGSETRNVEFKRGGGEYLSQAFKHHLRRYVCAFLNSEGGSLLVGVEDSGLVQGIRCSHRDEDRVRLLVDSILQGFKPQVFPDAYKLTFIPVVSTSATGTPLKVIRLSVHAPKAQAQPQLYETDQGEVFLRRDGSIQGPLSVRAIQEWGRQKWTAELSKLEERLRVLTAEKEQLQQQLRRYKPVSCTCCVL*