Sequence details bmy_19170 (Coding sequence)

Part of scaffold_1972 (Scaffold)

For more information consult the page for scaffold_1972 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDA ENSTTRG00000011277 (Bottlenosed dolphin)

Gene Details

cytidine deaminase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010692, Bottlenosed dolphin)

Protein Percentage 87.61%
cDNA percentage 89.09%
Ka/Ks Ratio 0.25974 (Ka = 0.0776, Ks = 0.2989)

CDA ENSBTAG00000006136 (Cow)

Gene Details

cytidine deaminase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008074, Cow)

Protein Percentage 84.07%
cDNA percentage 83.48%
Ka/Ks Ratio 0.17256 (Ka = 0.1028, Ks = 0.5958)

Additional orthologs identified in other species via the OPTIC pipeline.

CDA (Human)   Cda (Mouse)  

Genome Location

Sequence Coding sequence

Length: 342 bp    Location:206122..218341   Strand:+
Raw sequence 
>bmy_19170
ATGCCACAGGAAGTGGCTCTGCTGCAAATAGCACTGGGCTCTCTTCTCTTCTCAGGGTGCAACATAGAAAATGCCTGCTACCCACTGGGCGTCTGTGCTGAACGAACTGCCATCCAGAAGGCCATCTCAGAAGGGTACAAAGAGTTCAGGGCAATTGCTATCTCCAGTAACTTGCAAGATGATTTTATCTCCCCATGTGGGGCCTGCCGGCAGGTCATGAGAGAGTTCGGCACTGACTGGGCTGTCTACATGACCAAGCCAGATGGCACGTACGTTGTCAGGACAGTCCAGGAGCTGCTGCCTGCCTCCTTTGGGCCSGAGGACCTGCAGAAGATCCAGTGA

Related Sequences

bmy_19170T0 Protein

Length: 114 aa      View alignments
>bmy_19170T0
MPQEVALLQIALGSLLFSGCNIENACYPLGVCAERTAIQKAISEGYKEFRAIAISSNLQDDFISPCGACRQVMREFGTDWAVYMTKPDGTYVVRTVQELLPASFGPEDLQKIQ*