Part of scaffold_1952 (Scaffold)

For more information consult the page for scaffold_1952 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX17 ENSTTRG00000016920 (Bottlenosed dolphin)

Gene Details

syntaxin 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016041, Bottlenosed dolphin)

Protein Percentage 96.04%
cDNA percentage 97.36%
Ka/Ks Ratio 0.64337 (Ka = 0.0137, Ks = 0.0214)

STX17 ENSBTAG00000008016 (Cow)

Gene Details

Syntaxin-17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010541, Cow)

Protein Percentage 94.64%
cDNA percentage 96.19%
Ka/Ks Ratio 0.30742 (Ka = 0.024, Ks = 0.078)

STX17  (Minke Whale)

Gene Details

syntaxin 17

External Links

Gene match (Identifier: BACU017578, Minke Whale)

Protein Percentage 97.84%
cDNA percentage 98.7%
Ka/Ks Ratio 0.43918 (Ka = 0.0085, Ks = 0.0195)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 843 bp    Location:329353..328511   Strand:-
>bmy_19069
ATGTCTGAAGATGAAGAAAAAGTGAAATTACGCCGTCTTGAACCAGCTATTCAGAAATTTACTAAGATAGTAATCCCAACAGACCTGGAGAGGTTAAGAAAGCACCAGATAAATATTGAGAAGCAACTCTGCTCCAATATCCGAGAAATGGAGAAGCTTTGTTTGAAAGTCCAAAAGGATGACCTTGGACTTCTGAAGAGAATGATAGATCCTGTTAAAGAAGAAGCATCAGCAGCAACAGCAGAATTTCTTCAGCTCCATCTGGAATCCGTAGAAGAACTTAAGAAACAATTTAATGATGAAGAAACTTTATTACAGCTTTCTTTGACCAGATCCATGACTGTTGGTGGAACATTTCACACTACTGAAGATGAAGCTGATCCTCAGAGTATGACTCAGATATATGTGTTGCCTGAAATTCCTCGAGATCAMAATGCTGCAGAATCATGGGAAACCTTAGAAGTGGACTTAATTGAACTTAGCCAACTGGTCACTGATTTCTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGACAGCGTTGAAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAGGGAACCAAAAACTTGGGGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTGGGGGGTCTGATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGTTACAAAGAAAGAAACAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAAATCTTCCCAGCCAAACTGACAAAAAATGCAGTTAA

Related Sequences

bmy_19069T0 Protein

Length: 281 aa      View alignments
>bmy_19069T0
MSEDEEKVKLRRLEPAIQKFTKIVIPTDLERLRKHQINIEKQLCSNIREMEKLCLKVQKDDLGLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDEETLLQLSLTRSMTVGGTFHTTEDEADPQSMTQIYVLPEIPRDXNAAESWETLEVDLIELSQLVTDFSLLVNSQQEKIDSVEDHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALIGGVVGGLIGLLAGFKVAGIAAALGGGVLGFTGGKLLQRKKQKMMEKLTSSCPNLPSQTDKKCS*