Part of scaffold_1861 (Scaffold)

For more information consult the page for scaffold_1861 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LYSMD4 ENSTTRG00000015847 (Bottlenosed dolphin)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015013, Bottlenosed dolphin)

Protein Percentage 68.01%
cDNA percentage 72.17%
Ka/Ks Ratio 1.03795 (Ka = 0.2337, Ks = 0.2251)

BT.52985 ENSBTAG00000010192 (Cow)

Gene Details

lysM and putative peptidoglycan-binding domain-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013450, Cow)

Protein Percentage 86.55%
cDNA percentage 92.2%
Ka/Ks Ratio 0.57019 (Ka = 0.0697, Ks = 0.1223)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 894 bp    Location:51292..45680   Strand:-
>bmy_18784
ATGAGGCAGAAGGAAGTGTTAACCAAGACCTTCCAAGGCCCAGCCGTGGTCTGTAGGACTCCGACCAGCCACATTTACATGTTTGAGAATGGTGTTGGGGACTCCGGGGACTCCTCTGAGGAAGAGTCCCACCAAGAAGCTCTGCGGCCCCGGGGCAAGGAGCGCCAGAAGAAGGGTGCCCACCACCCTCACCAGCCAGGAGCAGGGGACATGGTGCTGCTGCAGCGGGAGCTGGCCCAGGAGGACAGCCTCAACAAGCTCGCTCTTCAGTATGGCTGCAAAGTTGCAGATATCAAGAAAGTCAACAACTTCATCAGAGAACAAGACTTACATGCTTTGAAATCTGTTAAGATTCCAGTGAAAAACCACGGGATCCTAACAGAGACCCACAAAGAACTCAGACCCCTCCTGAGCTCATCTACAGAGACCAGAGTGACCTGCGAGGAGCAGCCAGACCCAGACAGAGCAGCTGTCAGTGCCGGTGCCTCGTCTAACCCACTGACGGATTTCTTTAAGGGCATTGACCAGAATATTGAGCATGCAGTGCAGTCAGAAATCTTTTTGAGTGAAAGTTACTGCATAGAGACCTCCAGTCAGCCACTGCTTCCGACTCTTCCGAAGATACCTACAAACGGTGCAGACTGTGGAATTCAGAGATGGAATGCTGTTTTTATCATGCTTCTGATTGGAATTGTTTTACCAGTGTTTTATTTGGTCTATTTTAAAATACAAACTACTAGTGAGATCCCTAGTATCTTGAATACAACTGCTGTCCCTAATGGCTCGATGGCAGTGAGTGCAGTTTTAGGGCAATCTCCCAAATTAGCGATTCCATTGCCAACCATTCCCTCTTCAGACAGCCAGTTCAGTCAGACCACCCACGGGGAGAACTAG

Related Sequences

bmy_18784T0 Protein

Length: 298 aa      View alignments
>bmy_18784T0
MRQKEVLTKTFQGPAVVCRTPTSHIYMFENGVGDSGDSSEEESHQEALRPRGKERQKKGAHHPHQPGAGDMVLLQRELAQEDSLNKLALQYGCKVADIKKVNNFIREQDLHALKSVKIPVKNHGILTETHKELRPLLSSSTETRVTCEEQPDPDRAAVSAGASSNPLTDFFKGIDQNIEHAVQSEIFLSESYCIETSSQPLLPTLPKIPTNGADCGIQRWNAVFIMLLIGIVLPVFYLVYFKIQTTSEIPSILNTTAVPNGSMAVSAVLGQSPKLAIPLPTIPSSDSQFSQTTHGEN*