Sequence details bmy_18196 (Coding sequence)

Part of scaffold_1685 (Scaffold)

For more information consult the page for scaffold_1685 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC22A18 ENSTTRG00000009648 (Bottlenosed dolphin)

Gene Details

solute carrier family 22, member 18

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009139, Bottlenosed dolphin)

Protein Percentage 67.03%
cDNA percentage 72.39%
Ka/Ks Ratio 0.45944 (Ka = 0.1744, Ks = 0.3796)

BT.27443 ENSBTAG00000012742 (Cow)

Gene Details

solute carrier family 22 member 18

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016935, Cow)

Protein Percentage 73.3%
cDNA percentage 78.11%
Ka/Ks Ratio 0.18454 (Ka = 0.1811, Ks = 0.9812)

SLC22A18  (Minke Whale)

Gene Details

solute carrier family 22, member 18

External Links

Gene match (Identifier: BACU003588, Minke Whale)

Protein Percentage 80.98%
cDNA percentage 85.6%
Ka/Ks Ratio 0.53321 (Ka = 0.1426, Ks = 0.2674)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC22A18 (Human)   Slc22a18 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1110 bp    Location:338419..383468   Strand:+
Raw sequence 
>bmy_18196
ATGCGGGAAGTCAGGGCCTCCAGGGGCCAGGGCCAGTCCCCCAGCGGGATTGGCACTCTGGACCTGTCCTGGGTCATGCTGCTCGTGTACGTGCTGGCAGCCCTGGAGCTCGCCTGCCTCTTCATGCAGTTCTCCATCATGCCATACCTGTCCCGGAGGCTAGGCCTGGACTCTGTCGCCTTCGGCTACCAGCAGACCATCTTTGGCGTGCTTCAGCTGTTGGGCGGGCCGGTGTTTGGCAGGTTCGCAGACCAGCGCGGGGCGCGGGCAGCGTTCACGCTCTCCTTCCTGGCGTCCTCAGCGCTCTACCTGCTCCTGGCAGCCGCCTGCAGCCCGACCCTGCCCGGCGTGGCCTTACTCTTTGCCTCGCGCCTGCCCGGCGCCCTCATGCACACGCTGCCAGCCGTCCAGATGGTCATCACGGACCTGTCTGCGCCTGAGGAGCGGCCCGCGGCCCTGGGCCGGTTGGGTCTGTGCTTCGGCGTTGGCGTCATCTTCGGCTCCCTGCTCGGCGGGACCCTGAGCAGCACGTGCGGGATTCAGTGTCCGGTCATCGTGGCTCTTGTGGTCAACCTCCTGGGAGCCATCCTCAGCTTCACCTGCATCCCCACCAGCACCAAAGGGGCCAGCGCCCATGCCCAGGCTGCCCTGCCAGGTAAGCTGCACCAGACACACCCCAGCAGATACACACAAAGTAGGCCCCACCAGGTCTTCCAGGGCCTGGTCATCGGGTGGCTGAGCAGCCACTTCTCTGAGGGAGCCCTGCTCCGGGCCAGCGTGCTGCTCTTCAGCGTGGTGGGACTGGCCATGGCGCTGATGGCCAATGTCTTCCACTTCTGCCTCCTCATGCCCGGCCTGGTCTTCAGCCTGTGTGCCCTCAACGTGGTCACCGACAGCATGCTGACCAAGGCCGTCTCGGCCTCAGACACGGACTGTGATGTGACTGAGCTCTCTGAGGAGGTGCACATGGAGGAACAGAAGCGTCACATCACGACCGCAGAGGACAGGACTAGGGCATTTCGACTGCACGTGGCTGACCGAGGGGCCCTCCTCAGGCACCTCGCCCACTCCCAACCAACACAACAGACCGAAGGCTTCACGAAGGCTTAG

Related Sequences

bmy_18196T0 Protein

Length: 370 aa      View alignments
>bmy_18196T0
MREVRASRGQGQSPSGIGTLDLSWVMLLVYVLAALELACLFMQFSIMPYLSRRLGLDSVAFGYQQTIFGVLQLLGGPVFGRFADQRGARAAFTLSFLASSALYLLLAAACSPTLPGVALLFASRLPGALMHTLPAVQMVITDLSAPEERPAALGRLGLCFGVGVIFGSLLGGTLSSTCGIQCPVIVALVVNLLGAILSFTCIPTSTKGASAHAQAALPGKLHQTHPSRYTQSRPHQVFQGLVIGWLSSHFSEGALLRASVLLFSVVGLAMALMANVFHFCLLMPGLVFSLCALNVVTDSMLTKAVSASDTDCDVTELSEEVHMEEQKRHITTAEDRTRAFRLHVADRGALLRHLAHSQPTQQTEGFTKA*