Part of scaffold_1690 (Scaffold)

For more information consult the page for scaffold_1690 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM2 ENSTTRG00000005685 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005368, Bottlenosed dolphin)

Protein Percentage 98.0%
cDNA percentage 97.95%
Ka/Ks Ratio 0.1688 (Ka = 0.0058, Ks = 0.0345)

TRIM2 ENSBTAG00000008816 (Cow)

Gene Details

Tripartite motif-containing protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011609, Cow)

Protein Percentage 98.0%
cDNA percentage 94.05%
Ka/Ks Ratio 0.03593 (Ka = 0.01, Ks = 0.278)

TRIM2  (Minke Whale)

Gene Details

tripartite motif containing 2

External Links

Gene match (Identifier: BACU013580, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 99.19%
Ka/Ks Ratio 0.39078 (Ka = 0.0061, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2115 bp    Location:207599..102812   Strand:-
>bmy_18174
ATGGAGCCTCCCCTCTGGGCAAGGTGCCTGCAGAACTACATTCCTGCCCACAGTCTAACCCTCTCCTGCCCCGTGTGCCGCCAGACCTCCATCCTGCCCGAGAAGGGGGTGGCCGCGCTCCAGAACAACTTCTTCATCACAAACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAATGCTGAGGAGTCCTCCATCCTGGAGACAGTCACCGCTGTGGCTGCGGGGAAGCCTCTCTCTTGCCCAAACCACGATGGGAATTCCTGCGAGACCGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCGGAACACCCCACAGTCCCCCTCAAGGACGTGGTGGAGCAGCACAAGGCCTCACTCCAGGTCCAGCTGGACGCTGTCAACAAAAGGCTCCCAGAAATAGATTCTGCTCTTCAGTTCATCTCAGAAATCATCCATCAGTTAACCGACCAAAAGGCCAGCATTGTGGATGACATCCATTCTACCTTTGATGAACTCCAGAAGACTTTAAATGTGCGCAAGAGCGTGCTGCTTATGGAGCTGGAAGTCAACTATGGTCTCAAACACAAAGTCCTCCAGTCGCAGCTGGATACTCTGCTTGAGGGGCAAGAGAGTATCAAGAGCTGCAGCAGCTTCACGGCGCAGGCCCTCAACCATGGCACGGAGACGGAGGTGCTGCTTGTGAAGAAGCAGATGAGCGAGAAGCTGAACGAACTGGCGGACCAGGATTTTCCGCTGCACCCGCGAGAAAACGACCAGCTGGACTTCATCGTGGAGACCGAGGGGCTCAAGAAGTCCATCCACAACCTCGGGACGATTTTAACCACCAACGCCGTCGCCTCCGAGACGGTGGCCACGGGCGAGGGGCTGCGGCAGACCATCATCGGGCAGCCCATGTCCGTTACCATAACAACCAAGGACAAAGACGGCGAGCTGTGCAAAACGGGCAACGCCTACATCACGGCGGAGCTGAGCACGCCCGACGGCAGCGTGGCGGACGGGGAGATCCTGGACAACAAGAACGGCACGTACGAGTTCCTGTACACAGTACAGAAGGAGGGCGACTTCACCCTGTCCCTGCGGCTCTACGACCAGCACATCCGCGGCAGCCCGTTTAAGCTGAAGGTGATCCGGTCGGCGGACGTGTCCCCCACCACCGAGGGCGTGAAGAGGCGCGTGAAGTCCCCGGGGAGCGGCCATGTGAAACAGAAGGCGGTGAAGAGACCCGCCAGCATGTACAGCACCGGGAAACGAAAAGAGAATCCCATCGAAGACGATCTGATCTTCCGAGTGGGAACCAAAGGAAGAAATAAAGGGGAATTTACAAATCTTCAAGGGGTAGCAGCATCTACAAATGGGAAGATATTAATTGCAGACAGTAACAACCAGTGCGTGCAGATATTTTCCAATGATGGACAGTTCAAAAGTCGTTTTGGCATACGAGGACGCTCTCCCGGGCAGCTGCAGCGGCCCACGGGAGTAGCTGTGCATCCCAGTGGGGACATAATCATTGCAGATTATGATAATAAATGGGTTAGCATCTTCTCATCAGATGGGAAGTTTAAGACAAAAATCGGATCAGGAAAGTTGATGGGGCCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATCATCGTGGTGGATAACAAGGCGTGCTGCGTGTTTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGTAGCCGAGGAAATGGGGACAGGCAGTTTGCAGGTACACTCGATGGTCCCCATTTCGCAGCTGTAAATAGCAATAATGAGATTATTGTTACAGATTTCCATAATCATTCTGTCAAGGTGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGGAAATGGGCAGTTTAATGCTCCAACGGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTAGCAGACTGGGGAAACAGCAGGATCCAGGTTTTTGATGGAAGTGGATCGTTTTTGTCCTACATTAACACATCTGCTGACCCACTCTATGGCCCCCAAGGCCTGGCCCTAACTTCAGACGGCCACGTGGTGGTTGCAGACTCTGGAAACCACTGTTTCAAGGTGTATCGGTACTTACAGTAA

Related Sequences

bmy_18174T0 Protein

Length: 705 aa      View alignments
>bmy_18174T0
MEPPLWARCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTDQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLEGQESIKSCSSFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYITAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGTLDGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ*