Sequence details bmy_18167 (Coding sequence)

Part of scaffold_1650 (Scaffold)

For more information consult the page for scaffold_1650 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM5  (Minke Whale)

Gene Details

PR domain containing 5

External Links

Gene match (Identifier: BACU004217, Minke Whale)

Protein Percentage 84.93%
cDNA percentage 87.01%
Ka/Ks Ratio 0.43004 (Ka = 0.1177, Ks = 0.2736)

Additional orthologs identified in other species via the OPTIC pipeline.

PRDM5 (Cow)   PRDM5 (Human)   Prdm5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 822 bp    Location:127045..141830   Strand:+
Raw sequence 
>bmy_18167
CATATATTTTTAATTTTGTCTCAGGAAGGAGAAAACATTTTCTATTTGGCAATTGAAGATATAGAAACAGATACAGAGCTTCTGATTGGCTACCTGGATAGTGACATGGAGGCCGATGAGGAAGAACAGCAAATTATGACCATGATCAAAGAAGAGGAAGGTAACAATGCTAAAGGACGATCAACAGCTGGCAGAAAAGATCGCTTTGGCTGTAAAGAGGACTATGCCTGTCCCCAGTGTGAATCGAGTTTTACCAGTGAGGAAATTCTTGCTGAGCATCTTCAGACATTGCACCAGAAACCCACAGAGGAGAAAGAATTTAAGTGCAAGAGCTGTGGGAAGAAATTCCCAGTTAAACAGGCTTTGCAAAGACATGTTCTTCAGTGCTCAGCGAAAAGCAGTCTGAAGGATTCTTCACGAAGTTTTCAGTGCTCTGTTTGCAATTCTTCCTTCAGTTCAGCATCRAGGTTTTGGGATCCTAAGAAAAAACTCATGTGTTCAGTGTGCAATAAAAAGTGTTCTTCAGCATCAAGCCTGCAGGAACATAGGAAGATTCATGAGATATTTGACTGTCAAGAATGTATGAAGAAATTCATTTCAGCCAATCAGCTAAAACGTCATATGATCACCCACTCAGAAAAACGACCCTATAATTGTGAGATTTGTAATAAATCTTTCAAGAGGCTCGATCAAGTGGGTGCTCACAAAGTAATACACAGTGAAGATAAACCTTACAAATGCAAGCTTTGTGGAAAGGGATTTGCCCACAGAAATGTTTACAAGAATCACAAGAAGGTAAAAAGCTTATTAATATTGTTATAA

Related Sequences

bmy_18167T0 Protein

Length: 274 aa      
>bmy_18167T0
HIFLILSQEGENIFYLAIEDIETDTELLIGYLDSDMEADEEEQQIMTMIKEEEGNNAKGRSTAGRKDRFGCKEDYACPQCESSFTSEEILAEHLQTLHQKPTEEKEFKCKSCGKKFPVKQALQRHVLQCSAKSSLKDSSRSFQCSVCNSSFSSASRFWDPKKKLMCSVCNKKCSSASSLQEHRKIHEIFDCQECMKKFISANQLKRHMITHSEKRPYNCEICNKSFKRLDQVGAHKVIHSEDKPYKCKLCGKGFAHRNVYKNHKKVKSLLILL*