Sequence details bmy_17997 (Coding sequence)

Part of scaffold_1623 (Scaffold)

For more information consult the page for scaffold_1623 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST8SIA5 ENSTTRG00000014069 (Bottlenosed dolphin)

Gene Details

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013343, Bottlenosed dolphin)

Protein Percentage 92.44%
cDNA percentage 94.38%
Ka/Ks Ratio 0.46175 (Ka = 0.0522, Ks = 0.1131)

ST8SIA5 ENSBTAG00000001770 (Cow)

Gene Details

alpha-2,8-sialyltransferase 8E

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002317, Cow)

Protein Percentage 82.11%
cDNA percentage 84.56%
Ka/Ks Ratio 0.16875 (Ka = 0.1192, Ks = 0.7063)

ST8SIA5  (Minke Whale)

Gene Details

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5

External Links

Gene match (Identifier: BACU017647, Minke Whale)

Protein Percentage 92.89%
cDNA percentage 94.91%
Ka/Ks Ratio 0.57477 (Ka = 0.0489, Ks = 0.0851)

Additional orthologs identified in other species via the OPTIC pipeline.

ST8SIA5 (Human)  

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location:254132..189030   Strand:-
Raw sequence 
>bmy_17997
ATGCGCTACGCGGACCCCTCGGCGAACCGGGATTTGTTGGGGAACCGAACTTTGCTCTTCATCTTCATCTGCGCCTTCGCCTTGGTGACCTTGCTGCAACAGATCTTGTATGGCAGGAACTACATCAAGAGAGGTCTCCAGTTTGGTTGGCAGAGTGGTGATCAGCTGGCCAATTGGACGGGGATCTTTAATGTCATGGACGACCCAGCAGTGCAGAGTGGCAGTGACTCCAGCTCCAGGTACTTTGAATTTTACGAGGGCCCTTTTGAGTATAACTCCACGAGATGCCTGGAGCTGAGGCACGAGATCTTGGAAGTGAAGGTGCTTTCCATGGACCTCAGTTCCATGACCCCTCTGTTCTCTGAGAGGCTCTGCTCTGCCCTGTGTCACTGGTCTCTCTCCGTCTATCTCCTGCCCGGCAGGTCCACTCTGTCCAGGTGCTGCAATGCCCCCTCCTTCCTCTTCACCACCCAGAAGAACACGCCCCTGGGGACGAAACTCAAGTATGAGGTGGACACCAGCGGCATCTACCACATCAACCGGGAGATCTTCCACATGTTTCCCAAGGACATGCCCTACTACCGGTCCCAATTTAAGAAATGTGCCGTGGTGGGCAATGGGGGCATCCTAAAGAACAGCCGCTGCGGGAGGGAGATCAACAGCGCCGACTTTGTCTTCCGGTTCCACAAGCTGGAGAAGTGGCGGCGGCCCTTCTACCGGGTGCTGCAGGTGTACGAGAACGCGTCCGTGCTGCTGCCTGCATTCTACAACACGCGCAACACCGACGTGTCCATCCGCGTCAAGTACGTGCTGGACGACTTCGAGTCGCCGCAGGCCGTGTACTACTTCCACCCGCAGTACCTGGTCAACGTGTCGCGCTACTGGCTCAGCCTCGGGGTGCGCGCCAAGCGCATCAGCACCGGCCTCATCCTGGCCACGGCGGCGCTGGAACTGTGCGAGGAGGTGCACCTGTTCGGCTTCTGGGCCTTCCCCATGAACCCCTCGGGCCTCTCCATCACCCACCACTACTACGACAACGTCAAGCCCCGCCCGGGCTTCCACGCCATGCCCTCCGAGATCTTCAACTTCCTGCACCTGCACAGCCGCGGCATCCTGCGCGTGCACACGGGCACCTGCAACTGCTGCTGA

Related Sequences

bmy_17997T0 Protein

Length: 383 aa      View alignments
>bmy_17997T0
MRYADPSANRDLLGNRTLLFIFICAFALVTLLQQILYGRNYIKRGLQFGWQSGDQLANWTGIFNVMDDPAVQSGSDSSSRYFEFYEGPFEYNSTRCLELRHEILEVKVLSMDLSSMTPLFSERLCSALCHWSLSVYLLPGRSTLSRCCNAPSFLFTTQKNTPLGTKLKYEVDTSGIYHINREIFHMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRFHKLEKWRRPFYRVLQVYENASVLLPAFYNTRNTDVSIRVKYVLDDFESPQAVYYFHPQYLVNVSRYWLSLGVRAKRISTGLILATAALELCEEVHLFGFWAFPMNPSGLSITHHYYDNVKPRPGFHAMPSEIFNFLHLHSRGILRVHTGTCNCC*