Sequence details bmy_16352 (Coding sequence)

Part of scaffold_1300 (Scaffold)

For more information consult the page for scaffold_1300 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SUPT5H ENSTTRG00000003573 (Bottlenosed dolphin)

Gene Details

suppressor of Ty 5 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003349, Bottlenosed dolphin)

Protein Percentage 94.05%
cDNA percentage 93.86%
Ka/Ks Ratio 0.2821 (Ka = 0.0385, Ks = 0.1364)

BT.43451 ENSBTAG00000010467 (Cow)

Gene Details

transcription elongation factor SPT5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041740, Cow)

Protein Percentage 91.81%
cDNA percentage 88.68%
Ka/Ks Ratio 0.13731 (Ka = 0.0609, Ks = 0.4436)

SUPT5H  (Minke Whale)

Gene Details

suppressor of Ty 5 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU008309, Minke Whale)

Protein Percentage 94.97%
cDNA percentage 95.22%
Ka/Ks Ratio 0.36102 (Ka = 0.0378, Ks = 0.1046)

Additional orthologs identified in other species via the OPTIC pipeline.

SUPT5H (Human)   Supt5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3372 bp    Location:513735..535753   Strand:+
Raw sequence 
>bmy_16352
ATGGTGTCTGGATTTGGGGGGTTCAGTACACTGGTGCCCCAACCCTACCTGACCCTGCAGGTAGAGGAGGAGCGGCGGAGTGCAGCAGGTAGTGAGAAGGAGGAAGAGCCTGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAATATGATGAGGAAGAGGAGGAGGAAGATGATGACCGGCCCCCCAAGAAACCCCGCCACGGCGGCTTCATTCTGGATGAGGCTGATGTGGACGATGAGTATGAGGATGAGGACCAGTGGGAGGATGGAGCAGAGGACATCCTGGAGAAAGCCTCCAATATTGACAATGTTGTCTTGGATGAAGACCGTTCCGGGGCTCGCCGCCTGCAAAACCTCTGGAGGGACCAGCGAGAAGAAGAACTGGGCGAGTATTACATGAAGAAATACGCAAAGTCATCTGTGGGAGAGACGGTGTATGGAGGATCTGATGAGCTCTCGGATGACATCACCCAGCAGCAGCTGCTCCCGGGAGTCAAGGATCCCAATCTGTGGACTGTCAAATGTAAGATTGGGGAGGAACGGGCCACAGCCATTTCCTTGATGCGCAAGTTCATTGCCTACCAGTTCACAGACACGATTAAGTCGGTAGTGGCACCAGAGCATGTGAAGGGCTACATCTACGTGGAGGCCTACAAGCAGACCCATGTGAAGCAGGCCATCGAGGGCGTGGGCAACCTGCGGCTTGGCTACTGGAACCAGCAGATGGTACCCATCAAGGAGATGACAGATGTGCTCAAAGTGGTGAAGGAGGTGGCCAACCTGAAACCAAAATCCTGGGTCCGCCTCAAGCGGGGCATCTATAAGGACGACATCGCTCAGGTGGATTACGTGGAGCCCAGCCAAAACACCATCTCCCTGAAGATGATCCCGCGCATCGACTATGACCGCATCAAGGCCCGCATGAGCTTGGTATCATGGGGACGTGCTGCCGGTGGGGAGAGGGGGTGCTTGATACCCCTGCTGGTGGCCAAGCCCTTGTCCCTCACCCTTCCTACTCATGCCCCTTTTCCTACACAGAAAGACTGGTTTGCCAAAAGGAAGAAGTTTAAGCGGCCTCCACAGAGGCTGTTTGATGCAGAAAAGATCAGCCGGAAGGGCTTTCTGTTCAAGAGCTTTGCCATGTCTGCTGTGATCACGGAGGGTGTGAAGCCCACACTCTCTGAGCTGGAGAAATTTGAGGACCAGCCAGAGGGCATTGACCTCGAGGTGGTGACTGAAAGCACAGGGAAGGAGCGGGAACACAACTTCCAGCCTGGGGACAACGTGGAGGTGTGTGAGGGTGAGCTCATCAACCTGCAGGGCAAGATCCTCAGCGTGGATGGCAACAAGATCACCATCATGCCCAAGCACGAGGACCTCAAGGACATGCTGGAGTTCCCGGCCCAGGAACTTCGGAAGTACTTCAAGATGGGGGACCACGTGAAGGTGATTGCCGGCCGGTTCGAGGGCGACACAGGCCTCATTGTGCGGGTGGAGGAGAACTTCGTCATCCTCTTCTCTGACCTCACCATGCACGAGGTAGCTAGCGGAAGGCTGGGAGCGGGGTGGATGTGCCAGGAGGAGACCAAGGCCGATGAGCCACATGGACCCTGCTTCACCCTTTCCCATCTCCCACAGCTGAAGGTGCTCCCCCGGGACCTGCAGCTCTGCTCCGAGACGGCATCAGGTGTGGATGTCGGGGGCCAGCATGAATGGGGGGAGCTGGTGCAGCTGGACCCCCAGACCGTGGGTGTCATCGTGCGACTGGAGCGGGAGACCTTCCAGGTGCTGAACATGTATGGGAAGGTGGTGACTGTCAGGCACCAGGCTGTGACCCGGAAGAAGGACAACCGCTTTGCCGTGGCCCTGGACTCAGAGCAGAACAACATCCATGTGAAAGACATTGTCAAGGTCATTGATGGCCCCCACTCAGGCCGGGAGGGCGAGATTCGCCATCTTTTCCGCAGCTTCGCCTTCCTGCATTGCAAGAAACTGGTAGAGAACGGGGGCATGTTTGTCTGCAAGACCCGCCATCTGGTGCTGGCAGGGGGCTCGAAGCCGCGAGATGTGACCAACTTCACAGTAGGTGGCTTTGCCCCTATGAGCCCCCGGATCAGCAGCCCCATGCACCCCAGTGCTGGAGGTCAGCGTGGTGGCTTTGGCAGCCCGGGCGGCGGCAGTGGCGGCATGAGCAGGGGCCGGGGACGGAGAGACAACGAGCTCATCGGCCAGACTGTGCGCATCTCCCAGGGCCCTTACAAAGGCTACATTGGCGTGGTAAAAGATGCCACGGAGTCCACAGCCCGCGTGGAGCTGCACTCCACCTGCCAGACCATCTCAGTGGACCGTCAACGCCTCACCACGGTGGGCTCACGGCGCCCGGGCGGCATGACCTCGACCTATGGGCGGACACCCATGTATGGCTCCCAGACGCCCATGTACGGCTCTGGCTCCCGCACGCCCATGTACGGCTCTCAGACGCCTCTCCAGGATGGTAGTCGCACCCCACATTATGGCTCTCAGACGCCCCTGCATGATGGCAGCCGCACTCCTGCCCAGAGTGGGGCCTGGGACCCCAACAATCCTAACACACCATCACGGGCTGAGGAAGAATATGAGTACGCGTTCGATGATGAGCCGACCCCATCCCCACAGGCCTATGGGGGCACCCCCAATCCCCAAACACCTGGCTACCCAGACCCCTCATCCCCKCAGGTCAACCCGCAGTACAACCCGCAGACGCCAGGGACGCCAGCCATGTACAACACAGACCAGTTCTCCCCCTATGCAGCCCCCTCCCCGCAAGGCTCCTACCAGCCCAGCCCCAGCCCCCAGAGCTACCACCAGGTGGCGCCAAGCCCAGCAGGCTACCAGAACACCCACTCCCCAGCCAGCTACCACCCCACCCCGTCGCCCATGGCCTATCAGGCCAGCCCCAGCCCAAGCCCTGTTGGCTATAGTCCGATGACACCTGGAGCTCCCTCCCCTGGTGGCTACAACCCGCACACACCGGGCTCAGGCATTGAGCAGAACTCCAGCGACTGGGTGACCACTGACATCCAGGTGAAGGTGCGGGACACCTACCTGGATACCCAAGTGGTGGGGCAGACAGGCGTCATCCGCAGTGTCACGGGAGGCATGTGCTCCGTGTACCTGAAGGACAGCGAGAAGGTTGTCAGCATCTCCAGTGAGCACCTGGAGCCCATCACCCCGACCAAGAACAACAAGGTGAAGGTGATCCTGGGTGAGGATCGGGAAGCCACAGGTGTCCTGCTGAGCATTGATGGCGAGGATGGCATAGTCCGCATGGACCTGGATGAACAGCTCAAGATCCTCAACCTCCGCTTCCTGGGGAAGCTCCTGGAGGCCTGA

Related Sequences

bmy_16352T0 Protein

Length: 1124 aa      View alignments
>bmy_16352T0
MVSGFGGFSTLVPQPYLTLQVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLVSWGRAAGGERGCLIPLLVAKPLSLTLPTHAPFPTQKDWFAKRKKFKRPPQRLFDAEKISRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHEVASGRLGAGWMCQEETKADEPHGPCFTLSHLPQLKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA*