Part of scaffold_1300 (Scaffold)

For more information consult the page for scaffold_1300 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAMD4B ENSTTRG00000003554 (Bottlenosed dolphin)

Gene Details

sterile alpha motif domain containing 4B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003331, Bottlenosed dolphin)

Protein Percentage 99.41%
cDNA percentage 99.26%
Ka/Ks Ratio 0.12003 (Ka = 0.0027, Ks = 0.0222)

SAMD4B ENSBTAG00000009785 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006301, Cow)

Protein Percentage 97.23%
cDNA percentage 95.57%
Ka/Ks Ratio 0.10198 (Ka = 0.0156, Ks = 0.1525)

SAMD4B  (Minke Whale)

Gene Details

sterile alpha motif domain containing 4B

External Links

Gene match (Identifier: BACU008315, Minke Whale)

Protein Percentage 98.25%
cDNA percentage 98.69%
Ka/Ks Ratio 0.50611 (Ka = 0.0102, Ks = 0.0202)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2061 bp    Location:439718..463215   Strand:+
>bmy_16346
ATGATGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGTTCAAGGGCTGGAATGAGTGTGAACAGACAGTGGCCCTGCTGTCACTTCTGAAGCGGGTCACCCGCACCCAGGCCCGCTTCCTACAACTCTGCCTGGAGCACTCACTGGCGGACTGCAATGACATTCACCTGCTGGAGTCAGAGGCCAACAGTGCTGCCATCGTCAGCCAGTGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTACCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAGGCTGCTGCAGAAAGTGCTGGCCTACTCGATTGAGAGCAATGCCTTCATCGAGGAGAGCCGCCAGCTGCTCTCCTATGCCCTCATCCACCCGGCCACCACGCTGGAGGACCGCAATGCACTGGCCCTCTGGCTGAGTCACTTGGAAGAGCGGCTAGCTAGCGGCTTCCGCACCCGGCCTGAGCCCACCTACCACTCACGCCAGGGCTCAGATGAGTGGGGTGGCCCTGCAGAGCTGGGCCCTGGGGAGGCAGGACCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGACACGTGCCCTTCCACCCACCCAGCTCAGTGCCGCCAGCCATCAACAGTCTCCCCTGCCAAATCCACCCCAGCCCGCTGAAGCGCTCCATGTCGCTCATCCCCACGAGCCCCCAGGCCCCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGGGGCCCGGGCTGCTTTCACCACGCCCGACCACGCACCCCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGCAGCGAGCAGACGGAGGAGCAGGGCTCCAGCCGGAACACTTTTCAGGAGGACGGCAGTGGCATGAAAGATGTGCCCTCGTGGCTTAAGAGCCTCCGCTTGCACAAGTACGCGGCCCTCTTCTCACAGATGAGCTATGAGGAGATGATGACACTGACTGAGCAGCACTTGGAGTCTCAGAATGTCACCAAAGGTGCCCGCCACAAGATAGCCCTGAGCATCCAGAAGCTGCGCGAGAGGCAGAGTGTCCTCAAATCCCTGGAGAAGGATGTGCTGGAAGGCGGGAATCTGCGAAACGCTCTGCAGGAGCTGCAGCAGATCATCATCACCCCCATCAAGGCCTACAGTGTCCTCCAGGCCACTGTGGCTGCCGCCGCCACCGCTACCACCTCTACTGCCAAGGACGGGGGCCGGGGGGAGCCGCCGCTGCCAGGTGCGGAGCCTCCCCTGGCTCACCCTGGCACAGACAAGGGCAGTGAGGCCAAGGACCCTCCAGCTGCAGAGGGCTACCCCCCTCCACCAGCTCCAGCTCCCACTGATGGCAGTGAGCCAGCCCCGGCTCCCGTCGCTGATGGAGACATCCCCAGTCAGTTTACACGGGTGATGGGCAAAGTGTGCACCCAGCTGCTGGTGTCCCGACCAGATGAGGAGAACATCACCAGTTACCTCCAGCTCATCGAAAAGTGCCTGACTCATGAGGCTTTCACGGAAACGCAGAAGAAACGGCTGCTGTCCTGGAAACAGCAAGTGCTGAAGCTCCTCCGGACCTTCCCGCGCAAAGCCGCACTAGAGATGCAGAACTACCGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCACTCCCCATAGCTGGCTCTGTGGGGATGGGGGTGGCCCGGCGGACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTTCCGCCTGGCAGAATGGGCCTTCTGAGCCCCTCGGGCATTGGGGGCATCTCCCCTCGACATGCCCTCACCAGCCCCAGCCTTGGGGGCCAGGGCCGACAGAACCTGTGGTTCGCCAACCCTGGAGGCAGCAACAGCATGCCCAGCCAGAGCCGCAGCTCTGTGCAGCGGACCCACTCGCTCCCGGTCCACTCGTCCCCCCAGGCCATTCTCATGTTCCCTCCAGACTGCCCGGTCCCTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGGTGAGCATTTCCTCTTTCCCTGA

Related Sequences

bmy_16346T0 Protein

Length: 687 aa      View alignments
>bmy_16346T0
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLESEANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIEESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPTYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPPSSVPPAINSLPCQIHPSPLKRSMSLIPTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAAATATTSTAKDGGRGEPPLPGAEPPLAHPGTDKGSEAKDPPAAEGYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGISPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLEINPTLESLCLSMTEHALGGEHFLFP*