Part of scaffold_1300 (Scaffold)

For more information consult the page for scaffold_1300 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000011783 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011176, Bottlenosed dolphin)

Protein Percentage 93.89%
cDNA percentage 93.81%
Ka/Ks Ratio 0.18257 (Ka = 0.0174, Ks = 0.0955)

HNRNPL ENSBTAG00000001055 (Cow)

Gene Details

heterogeneous nuclear ribonucleoprotein L

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031993, Cow)

Protein Percentage 95.0%
cDNA percentage 92.75%
Ka/Ks Ratio 0.13036 (Ka = 0.0347, Ks = 0.2664)

HNRNPL  (Minke Whale)

Gene Details

heterogeneous nuclear ribonucleoprotein L

External Links

Gene match (Identifier: BACU008333, Minke Whale)

Protein Percentage 93.44%
cDNA percentage 94.72%
Ka/Ks Ratio 0.32992 (Ka = 0.0405, Ks = 0.1228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location:43032..30576   Strand:-
>bmy_16327
CTCCCTCCCCCAAAACTTCCCAGTGTCTGCTCTCTTTTCGATCTCGGACGGCCGGCCAGGCTCGCCGCCGAACTGGAGAACTACGATGACCCGCACAAAACCCCCGCCTCCCCAGTTGTCCACATCAGGGGCCTGATTGACGGCGTGGTGGAAGCTGACCTTGTGGAGGCCTTGCAGGAGTTTGGACCCATCAGTTATGTGGTGGTAATGCCTAAAAAGAGACAAGCGTTGGTGGAATTTGAAGATGTGTTGGGGGCTTGCAACGCCGTGAACTACGCAGCCGACAACCAGATCTACATTGCGGGCCACCCAGCTTTTGTCAATTACTCTACCAGCCAGAAAATCTCCCGCCCCGGGGACTCGGATGACTCCAGGAGCGTCAACAGTGTGCTTCTCTTTACCATCCTGAACCCCATCTATTCGATTACCACGGATGTTCTTTATACTATCTGTAACCCTTGTGGTCCTGTCCAGAGAATTGTCATTTTCCGGAAGAATGGAGTCCAGGCTATGGTGGAATATCCTTTGCTGGGAAATGGGTGTTCCTTGAGATGGGAGCTCACAGGGCTCGCTCTTTTCAGAGAGCTCTTGGGATRGGACTTTCCCTTAACTGTACTCACATTTGACTCTGTGCAGAGTGCCCAGCGGGCCAAGGCCTCACTCAATGGGGCTGACATCTACTCAGGCTGTTGCACTCTGAAGATTGAATATGCGAAGCCTACACGCTTAAACGTGTTCAAGAATGATCAGGATACTTGGGACTACACAAACCCCAACCTCAGTGGACAAGGTGACCCTGGCAGCAACCCTAACAAACGCCAGAGGCAGCCCCCTCTCCTGGGAGATCACCCCGCAGAATATGGTGAGGGCAGGGGGTTCCCCTCCGTGGACTCCCGTGGCTCATGTGCCCCTGCCCGCCGCCCGACGCGCAAATTCTCACCCGTCCTCCCTCTCTTTCCTTCCCACCCCCCAGGAGGGCCCCACGGTGGGTACCACAGCCATTACCATGATGAGGGCTACGGGCCCCCCCCACCTCACTACGAAGGGAGAAGGATGGGCCCACCAGTGGGGGGTCACCGCCGGGGCCCAAGTCGCTACGGCCCCCAGTATGGTCACCCCCCACCCCCTCCCCCACCACCCGAGTATGGCCCCCACGCCGACAGCCCTGTGCTCATGGTCTATGGCTTGGATCAGTCTAAGATGAACTGTGACCGGGTCTTCAATGTCTTCTGCTTGTATGGCAATGTGGAGAAGGTGAAATTCATGAAAAGCAAGCCAGGGGCCGCCATGGTGGAGATGGCTGATGGCTATGCTGTGGACCGGGCCATCACTCACCTCAACAACAACTTCATGTTTGGGCAGAAGCTGAATGTCTGTGTCTCCAAACAACCAGCCATCATGCCCGGTCAGTCA

Related Sequences

bmy_16327T0 Protein

Length: 471 aa      View alignments
>bmy_16327T0
LPPPKLPSVCSLFDLGRPARLAAELENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEYPLLGNGCSLRWELTGLALFRELLGXDFPLTVLTFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGEGRGFPSVDSRGSCAPARRPTRKFSPVLPLFPSHPPGGPHGGYHSHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPAIMPGQS