Part of scaffold_1272 (Scaffold)

For more information consult the page for scaffold_1272 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT7 ENSTTRG00000000827 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 7 (eta)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000780, Bottlenosed dolphin)

Protein Percentage 96.49%
cDNA percentage 95.88%
Ka/Ks Ratio 0.02951 (Ka = 0.0009, Ks = 0.0305)

CCT7 ENSBTAG00000012756 (Cow)

Gene Details

T-complex protein 1 subunit eta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016954, Cow)

Protein Percentage 98.71%
cDNA percentage 94.76%
Ka/Ks Ratio 0.02895 (Ka = 0.0061, Ks = 0.2109)

CCT7  (Minke Whale)

Gene Details

chaperonin containing TCP1, subunit 7 (eta)

External Links

Gene match (Identifier: BACU010563, Minke Whale)

Protein Percentage 99.45%
cDNA percentage 99.08%
Ka/Ks Ratio 0.17579 (Ka = 0.0043, Ks = 0.0244)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1632 bp    Location:272973..256169   Strand:-
>bmy_16177
ATGATGCCCACACCAGTTATCCTGTTGAAAGAGGGGACTGATAGCTCCCAAGGCATCCCCCAGCTTGTAAGTAACATCAGTGCCTGCCAGGTGATTGCTGAGGCTGTAAGAACTACCCTGGGCCCCCGTGGTATGGACAAGCTCATTGTGGATGGCCGAGGCAAAGCAACAATTTCTAATGATGGGGCCACAATTCTGAAACTCCTTGATGTTGTCCATCCTGCAGCAAAGACTTTAGTGGACATTGCCAAATCCCAAGATGCTGAGGTCGGTGATGGCACCACCTCAGTGACCCTGCTGGCTGCAGAGTTTCTGAAGCAGGTGAAACCCTATGTGGAGGAAGGTTTGCACCCACAGATCATCATCCGAGCTTTCCGCACTGCCACTCAGTTGGCAGTTAACAAGATTAAAGAGATCGCCGTGACTGTGAAGAAGGAAGATAAAGTGGAGCAGAGGAAGCTGCTAGAGAAATGTGCCATGACTGCTCTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCCTTCTTCGCTAAGATGGTGGTGGATGCGGTGATGATGCTCGATGACTTGCTGCAGCTTAAAATGATTGGAATCAAGAAGGTTCAGGGTGGAGCCCTAGAGGAGTCCCAACTTGTAGCTGGTGTTGCATTCAAGAAGACTTTCTCTTATGCTGGGTTTGAAATGCAACCCAAAAAGTACCATAATCCAATGATTGCCCTTTTAAATGTTGAGCTCGAGCTGAAAGCTGAGAAGGATAATGCGGAAATCAGAGTGCACACGGTTGAGGATTATCAGGCAATTGTTGATGCTGAATGGAACATTCTTTATGACAAGTTAGAGAGGATCCATCACTCCGGAGCCAAAGTCGTCTTGTCCAAACTCCCCATTGGGGACGTGGCCACCCAGTACTTTGCTGACAGGGACATGTTCTGTGCTGGCCGAGTGCCGGAGGAGGACCTGAAGAGGACAATGATGGCTTGCGGAGGCTCCATCCAGACCAGTGTGAACGCTCTGTCATCAGATGTTCTGGGCCGCTGCCAGGTCTTTGAAGAGACCCAGATTGGAGGCGAGAGGTACAATTTCTTCAAAGGCTGCCCCAAGGCCAAGACTTGTACTATCATCCTCCGTGGTGGCGCTGAGCAGTTTATGGAGGAGACAGAGCGGTCCCTGCACGACGCCATCATGATTGTCAGAAGGGCCATCAAGAATGATTCAGTGGTGGCTGGTGGCGGCGCCATTGAGATGGAGCTCTCCAAGTACCTGCGAGATTACTCAAGGACCATTCCAGGAAAACAGCAGCTATTGATTGGGGCCTATGCCAAGGCGTTGGAAATTATCCCACGCCAGCTGTGTGACAACGCTGGCTTTGATGCCACAAACATCCTCAACAAGCTGCGGGCTCGGCACGCCCAGGGGGGCATGTGGTACGGTGTGGACATCAACAATGAGGACATAGCTGACAACTTTGAGGCCTTCGTGTGGGAGCCAGCTATGGTGCGGATCAATGCCCTGACTGCAGCCTCTGAGGCTGCGTGCCTTATCGTGTCCGTAGATGAAACCATCAAGAACCCTCGCTCAACAGTGGATGTCCCCCCAGCTGCTGGCCGGGGCCGAGGTCGTGGCCACCCCCATTGA

Related Sequences

bmy_16177T0 Protein

Length: 544 aa      View alignments
>bmy_16177T0
MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLERIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFKGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDVPPAAGRGRGRGHPH*