Part of scaffold_1244 (Scaffold)

For more information consult the page for scaffold_1244 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBPJ ENSTTRG00000009022 (Bottlenosed dolphin)

Gene Details

recombination signal binding protein for immunoglobulin kappa J region

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008554, Bottlenosed dolphin)

Protein Percentage 80.37%
cDNA percentage 85.12%
Ka/Ks Ratio 0.53727 (Ka = 0.1429, Ks = 0.2659)

RBPJ ENSBTAG00000003602 (Cow)

Gene Details

Recombining binding protein suppressor of hairless

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004696, Cow)

Protein Percentage 81.53%
cDNA percentage 84.71%
Ka/Ks Ratio 0.40416 (Ka = 0.1337, Ks = 0.3309)

Genome Location

Sequence Coding sequence

Length: 2472 bp    Location:45914..27319   Strand:-
>bmy_15965
ATGGCAGAGGGGGATGTGCCATTGAGACTCTTCTGGCTGCATGAAGAAAATTCGCTAGTATTTATACCTTTTACAAAACCAGATACTGGTATCAATGAACCATCATTACAGGGCCAGAAATTATTAAGTAATATAGCCAATCAGAACTATGGACTTGTCAGAGATAAAGGATATCAACCTTTCAAATTAGATATGATACTACAGCTGGGGAGAAAAGAGAAGCTTTGGGTGATGGAGCCAGAAACCCAAGGAGCTGGGTGTTCAGGACACGGGAACCAAAATGAGATAGAGACTCTTCAAGAAGCAGGATTAAGACAGCTTTTACATGAAGGCCTTATGTGCTGGCAGATATGGGAACAGTTTACAAGTAAATTAACCAGAACTCAGGACTCAATGATAAAGCTGCAAGGCAAGAAGTTGCCAAAACAAGATGATTCCTCCTATGAGGCGTGGTCAGGAGAGTCTACTCAGGTTCCTGAAGATGAGAACTATGTAGGAAAGCTTCAAGGGGAGAGTTCCACAAGTATCAAAAATCAAGAGTCTCCAACTCAGACCTCCTGGGATTTCTGGAGGAAAATGTATCTGAGAGAGTCACAGAATTATCAGAGTAGGTGTCAGCAAATTGACATAAAAGATAAACTGTGTCAGTGTGATCACTGTGTCATGAGAAGGATCTCTCATCACCATGGCAATCAGGAAGTACACAAAAGCGAGAAGGCTTGTGGCCACAATAATCATGGAAAAGACTTTGTGAAGAACACATCCCAGCATAGCATCATCCACTCAGGAGAGCAGACCTCTGATGAGACTGGAAAAGGTGTCAGCCTTGGCTATGATGTGGAACTTCATCAGCAGTTGCGTGTAGGAGAGAAGCCCCATGTGTGTAGTGAGTGTGGGAAGGGCACCACGTATAACTCAGTGTTTCACTTTCATTACAGTGTTCACAGAGGAGGGAAACGCAGTGGGAATGATGAGTGTGGGGTGGACTTGGGTCAGAGCTCACATCCGCAGACCCGTCAGAGAGCCAACCCAGGGGAGAAACCCTACAGATGTGGGGTGTGTGCTGCTGAGAGCTTCAATCAGAACTCCTCCCTTCCCACTCATGAGCCCATTCACCAGGGGGAGAATCTGTTCATCCGAATTCCATTGGAGGAGACCTGTTTGTTGTATGAGTATGGCCAATGTGTCCAGCAGAGCCAAAAATGTCACAATTCTCAAGAGAATGCACAGCAGAGAAACCTTTGGATGGAAGAAAAAAAAAAAGAACAAATGGAACGCGATGGTTGTTCTGAACAAGAGTCTCAACCATGTGCATTTATTGGAATAGGAAATAGTGACCAAGAAATGCAGCAGCTGAACTTGGAAGGAAAGAACTATTGCACGGCCAAAACATTGTATATATCTGATTCAGACAAGAGGAAGCACTTCATGCTGTTTCAAGCGGATAAAAGTCATCTCCAAACCTTCCAAAAAGAAGCAGTCATTGAAAATGCTGACTTATACATTGCCTCAGGAACAAAGGTGGCTCTGTTTAATCGACTTCGATCCCAGACAGTTTGTACCAGATACTTGCATGTAGAAGGAGGTAATTTCCATGCCAGTTCTCAGCAGTGGGGAGCATTTTACATTCATCTCTTAGATGATGATGAATCAGAAGGAGAAGAATTCACAGACCGCGATGGATACATCCGTTATGGACAAACAGTCAAACTTGTGTGTTCAGTTACTGGCATGGCACTCCCAAGATTGATAATTAGGAAAGTTGATAAGCAGACCGCATTACTGGATGCAGATGATCCTGTGTCACAGCTCCATAAATGTGCATTTTACCTTAAGGATACAGAAAGAATGTACTTGTGCCTTTCTCAAGAAAGAATAATTCAGTTTCAGGCCACTCCATGCCCAAAAGAACCAAATAAAGAGATGATAAATGATGGCGCTTCCTGGACAATCATTAGTACGAATAAGGCAGAGTATACATTTTACGAGGCGATGGGCCCTGTCCTTGCCCCAGTCATACCCATGCCTGTTGTAGACAGTCTTCAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAGCTTACAGGACAGAATTTCACTCCAAATTTACGAGTGTGGTTTGGGGATGTAGAAGCTGAAACTATGTACAGATGTGGAGAGAGTATGCTCTGTGTTGTCCCAGACATTTCTGCATTCCGAGAAGGCTGGAGAGGGGTCTGGCAGCCAGTCCAGGTTCCAGTGACTTTGGTCCGTAATGATGAAATCATTTATTCCACCAACACCCCAGAACTGGGGCCCTACACCCCAGAACTGGCGCCATGGCCACATTGCAGTGCAGCGGGAGCAATCCTTCGAGCCAACTCCAGCCAAGTGCCCCCTAATGAGTCAAACACAAACAGTGAGGGGAATTACACAAATGTCAGCACAAATTCAACCAATGTCACATCATCTACAGCAACAGTTGTGTCCTAA

Related Sequences

bmy_15965T0 Protein

Length: 824 aa      View alignments
>bmy_15965T0
MAEGDVPLRLFWLHEENSLVFIPFTKPDTGINEPSLQGQKLLSNIANQNYGLVRDKGYQPFKLDMILQLGRKEKLWVMEPETQGAGCSGHGNQNEIETLQEAGLRQLLHEGLMCWQIWEQFTSKLTRTQDSMIKLQGKKLPKQDDSSYEAWSGESTQVPEDENYVGKLQGESSTSIKNQESPTQTSWDFWRKMYLRESQNYQSRCQQIDIKDKLCQCDHCVMRRISHHHGNQEVHKSEKACGHNNHGKDFVKNTSQHSIIHSGEQTSDETGKGVSLGYDVELHQQLRVGEKPHVCSECGKGTTYNSVFHFHYSVHRGGKRSGNDECGVDLGQSSHPQTRQRANPGEKPYRCGVCAAESFNQNSSLPTHEPIHQGENLFIRIPLEETCLLYEYGQCVQQSQKCHNSQENAQQRNLWMEEKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLFQADKSHLQTFQKEAVIENADLYIASGTKVALFNRLRSQTVCTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTDRDGYIRYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGASWTIISTNKAEYTFYEAMGPVLAPVIPMPVVDSLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRGVWQPVQVPVTLVRNDEIIYSTNTPELGPYTPELAPWPHCSAAGAILRANSSQVPPNESNTNSEGNYTNVSTNSTNVTSSTATVVS*