Part of scaffold_1218 (Scaffold)

For more information consult the page for scaffold_1218 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN3 ENSTTRG00000002559 (Bottlenosed dolphin)

Gene Details

calpain 3, (p94)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002401, Bottlenosed dolphin)

Protein Percentage 81.29%
cDNA percentage 84.88%
Ka/Ks Ratio 0.5644 (Ka = 0.1063, Ks = 0.1884)

CAPN3 ENSBTAG00000008868 (Cow)

Gene Details

calpain-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011677, Cow)

Protein Percentage 86.75%
cDNA percentage 87.53%
Ka/Ks Ratio 0.26533 (Ka = 0.0951, Ks = 0.3585)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2109 bp    Location:342221..364804   Strand:+
>bmy_15854
ATGACCTGTGCCGCGTGTTTGCCTGCAGGGGACTGCTGGTTTCTCGCAGCCATCGCTTGCCTGACCCTGAACAAGCGACTGCTTTTCCGGGTCATACCCCATGAACAGAGTTTCACCGAAAACTACGCGGGGATCTTTCACTTCCAGTTCTGGCGCTATGGAGACTGGGTGGACGTGGTTATTGATGACTGCCTGCCAACTTACAACAATGAACTGGTTTTCACCAAATCCAACCACCACAATGAGTTCTGGAGTGCTCTGCTGGAGAAGGCTTATGCTAAGCTCCATGGTTCATATGAAGCCCTGAAAGGTGGGAACACTACAGAGGCCATGGAGGACTTCACAGGAGGAGTAACAGAGTTTTTTGAAATCAAGGATGCTCCCAGAGACATGTACAAGATCATGAAGAAAGCCATCGAGAGGGGCTCCCTCATGGGTTGCTCCATTGATACCGTTGTTCCAGTTCAGTACGAGACAAGAATGGCCTGCGGGCTGGTCAAAGGCCACGCCTACTCGGTCACTGGGCTGGAGGAGGCCCTGTACAAGGGTGAGAAAGTGAAGCTGGTGCGGCTGCGGAACCCCTGGGGCCAGGTGGAGTGGAATGGCCCCTGGAGTGACAGTTGGAAGGACTGGAGCTTTGTGGGCAAGAACGAGAAGGCCCGTCTGCAACACCAGGTCACGGAGGATGGAGAGTTCTGGATGTCCTATGATGATTTCATCTACCATTTCACAAAGCTGGAGATCTGCAACCTCACAGCTGATGCCCTGGAGTCCGACAAGCTTCAGACTTGGACAGTGTCCGTGAACGAGGGCCGCTGGGTGAGGGGCTGCTCTGCTGGAGGCTGCCGCAACTTCCCAGACACTTTCTGGACCAACCCTCAGTACCGTCTGAAGCTCCTGGAGGAGGACGACGACCCTGACGACTCCGAGGTGATCTGCAGCTTCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTGGGGGCCAACCTCTTCACCATCGGCTTCGCCATCTACGAGATGCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGYAAAACCTACATCAACATGCGGGAGGTGTCTGAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATTGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGAGGGAGTTGAGAATACAATCTCTGTGGATCGGCCAGTGGTAAGTGGTTTGGCTCTTACGTGTGAGAAGGCCCAGGGGACAGAAAAAGAAAAAAACCAAGGTGGGTGTAAGAGGCCTATCATCTTCGTTTCAGACAGAGCAAACAGCAACAAGGAGCTGGGTGTGGACCAGGAATCAGAGGAGGGCAAAGATAAAACAAGCCCTGATAAGCAAGCGAAATCCCCACAGGACATGGAGGTCTGTGCAGATGAGCTCAAGAATATCCTTAACAGAGTTGTGAACAAACGTGAGTGGCTCAAACTCTGTGAGAAACAGCACTATGACACAGACCAATCCGGCACCATCAACAGCTATGAGATGCGAAATGCAGTCAATGACGCAGGTGTGGGGAAGAAAGGGGGTGGCCAGGATGCGGACTGGAGCCGGCCACAGAGTGACCAGGAGGCAGGGGAGATAGCAAGCAGGCCTGAGGACTTCAAGCCTACCTCCACCTCTCCTGTGCTCTCCCCAACAGGCTTCCACCTCAACAACCAGCTCTACGACATCATCACCATGCGCTATGCAGACAAGTACATGAACATCGACTTCGACAGAGCTTTTAATGCATTTGACAAGGATGGTGACGGTATCATCAAACTCAACGTTCTAGAGGTAAAGCCTAATAGAAGCAGTACAATCCCCCTGTACCTTAAAATTCGAGGTAGAGGAATCCATGAGGAAGACTGGACACACTATGTGCTCCTCACTTCCCAACGGTGGTGGAGGGATGGGACGGGAAAGGAACATAAAAGGGAGCTCACGGCTCAGCAGGATGTGGCTCATAGGGAACGTGTACTGGGGGAAGGCTCCAAAGAGGCCTCAGTTCTACAATGA

Related Sequences

bmy_15854T0 Protein

Length: 703 aa     
>bmy_15854T0
MTCAACLPAGDCWFLAAIACLTLNKRLLFRVIPHEQSFTENYAGIFHFQFWRYGDWVDVVIDDCLPTYNNELVFTKSNHHNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKDAPRDMYKIMKKAIERGSLMGCSIDTVVPVQYETRMACGLVKGHAYSVTGLEEALYKGEKVKLVRLRNPWGQVEWNGPWSDSWKDWSFVGKNEKARLQHQVTEDGEFWMSYDDFIYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEMHGNKQHLQKDFFLYNASKARSKTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEGVENTISVDRPVVSGLALTCEKAQGTEKEKNQGGCKRPIIFVSDRANSNKELGVDQESEEGKDKTSPDKQAKSPQDMEVCADELKNILNRVVNKREWLKLCEKQHYDTDQSGTINSYEMRNAVNDAGVGKKGGGQDADWSRPQSDQEAGEIASRPEDFKPTSTSPVLSPTGFHLNNQLYDIITMRYADKYMNIDFDRAFNAFDKDGDGIIKLNVLEVKPNRSSTIPLYLKIRGRGIHEEDWTHYVLLTSQRWWRDGTGKEHKRELTAQQDVAHRERVLGEGSKEASVLQ*