Part of scaffold_1230 (Scaffold)

For more information consult the page for scaffold_1230 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHD ENSTTRG00000001697 (Bottlenosed dolphin)

Gene Details

Src homology 2 domain containing transforming protein D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001602, Bottlenosed dolphin)

Protein Percentage 99.7%
cDNA percentage 98.21%
Ka/Ks Ratio 0.0212 (Ka = 0.0014, Ks = 0.0655)

SHD ENSBTAG00000039696 (Cow)

Gene Details

SH2 domain-containing adapter protein D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053657, Cow)

Protein Percentage 93.73%
cDNA percentage 92.14%
Ka/Ks Ratio 0.10039 (Ka = 0.03, Ks = 0.2987)

SHD  (Minke Whale)

Gene Details

Src homology 2 domain containing transforming protein D

External Links

Gene match (Identifier: BACU002610, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.2%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0324)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location:276662..271269   Strand:-
>bmy_15834
TCTTTCTCCTCCTCCTTCCTCCCTTCCTCCCTTCCTTCCCCCCCTGCTCCTCCCTGGGGACTCTGCCGAGGAAGGGGGCCCAGAAGAGGGCATGTGGGTCCTCTTCTGACAGTGGCCAGGTTTGGGGTGACACGCGCTCAAATGGCCAAGTGGCTACGAGACTACCTGAGCTTTGGCGGTCGGAGGCCCCCTCCGCAGCCGCCCACCCCCGACTACACGGACAGCGACATCCTGCGGGCCTACCGGGAGCAGAAAGATTTGGACTTTGAGGACCCCTATGAGGATGCAGATGGCCGCCTAGAGACCGACTCCGCGGGGCCCGGGGACTCCACCAAGCACGACTCCCCAAAGCACCGGCTCATCAAGGTGGAGGCAGTCGACATGGCCAGAGCCAAGGTCTTGCTGGGCAGCCCCCGGGAAGAGTTGGAAGTCGACACCGAGTACTCAGACCCCTTTGATGCCCAACCTCACCCGTCACCCCCGGATGACGGCTACATGGAGCCCTACGATGCCCAGCGAGTCATGAGTGAACTGCCATACAGGAGGGTGCAGCTGTATGACACTCCCTATGAGGAGCAGGACCAAGATCTGGGAGATGGGCCTCCTTCAGGGTGGAAACCTCGGCAGAGCCGGCTGCCCCAGGAGGATGAACGGCCAGCGGACGAGTATGACCAGCCCTGGGAGTGGAAGAAAGACCACATCTCCAAGGCGTTTGCAGTGCAGTTTGACGGTCCGGAGTGGGAAAGAACCTCAGGCTCAGCCAAGGAACTCCGGAGACTCCCGCCCAGAAGCCCCCAGCCTGCAGAGCGCGTGGACCCGGCCCTGCCTCTGGAAAAACAGCCGTGGTTTCACGGCCCGTTGAGCCGGGCAGATGCCGAGAACCTCCTGTCGCTCTGCAAGGAAGGCAGCTACCTTGTGCGGCTCAGCGAGACCAGCCCCCAAGACTGCTCCCTATCCCTCAGGAGCAGCCAGGGCTTCCTGCATCTGAAGTTTGCTCGGATCCGAGAGAACCAGTTCGTGCTGGGTCAGCACAGCGGCCCCTTCCCCAGCGTGCCGGAGCTGGTGCTCCATTATAGCTCCCGCCCACTGCCCGTGCAGGGCGCTGAGCATCTGGCCCTGCTGTACCCCGTGGTCTCACAGACCCCCTGA

Related Sequences

bmy_15834T0 Protein

Length: 383 aa      View alignments
>bmy_15834T0
SFSSSFLPSSLPSPPAPPWGLCRGRGPRRGHVGPLLTVARFGVTRAQMAKWLRDYLSFGGRRPPPQPPTPDYTDSDILRAYREQKDLDFEDPYEDADGRLETDSAGPGDSTKHDSPKHRLIKVEAVDMARAKVLLGSPREELEVDTEYSDPFDAQPHPSPPDDGYMEPYDAQRVMSELPYRRVQLYDTPYEEQDQDLGDGPPSGWKPRQSRLPQEDERPADEYDQPWEWKKDHISKAFAVQFDGPEWERTSGSAKELRRLPPRSPQPAERVDPALPLEKQPWFHGPLSRADAENLLSLCKEGSYLVRLSETSPQDCSLSLRSSQGFLHLKFARIRENQFVLGQHSGPFPSVPELVLHYSSRPLPVQGAEHLALLYPVVSQTP*