Part of scaffold_1220 (Scaffold)

For more information consult the page for scaffold_1220 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V0D2 ENSTTRG00000002863 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002684, Bottlenosed dolphin)

Protein Percentage 99.06%
cDNA percentage 98.12%
Ka/Ks Ratio 0.08232 (Ka = 0.0045, Ks = 0.0551)

ATP6V0D2 ENSBTAG00000021092 (Cow)

Gene Details

V-type proton ATPase subunit d 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028091, Cow)

Protein Percentage 95.79%
cDNA percentage 92.37%
Ka/Ks Ratio 0.08397 (Ka = 0.0225, Ks = 0.2681)

ATP6V0D2  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2

External Links

Gene match (Identifier: BACU006251, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.91%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0386)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 747 bp    Location:419748..407790   Strand:-
>bmy_15817
ATGGAAGCAGTCAACATTGCAGAGACACCTTCTGATCTCTTTAATGCCATTCTGGTTGAAACACCATTAGCTCCATTCTTTCAAGACTGTATGTCTGAAAATACTCTAGACGAACTGAATATTGAAATACTGCGCAATAAACTGTACAAGTCTTACATCGAGGCATTCTATAAATTCTGTAAGAATCATGGTGATGTCACAGCAGAAATTATGTGTCCCATTCTTGAGATTTCATCTGTGCCCACAGGCCCTCTTGCTTGCAATGTCAATCTGCACATGCATGAGGGACTCAGGCCAGAGATCAGAATGTTTGAGGCAGACAGACGTGCTTTTATCATCACTCTTAACTCCTTTGGCACCGAGTTGAGCAAAGAGGACCGCGAGACCCTCTACCCGACCTGTGGCAAGCTCTATCCCGAGGGACTGCGCCTACTGGCCCAAGCAGAGGACTTCGAGCAAATGAAGAGAGTAGCGGACCATTATGGAGTATACAAGCCTTTGTTTGAGGCTGTAGGTGATGGCAGTGGGGGAAAGACATTGGAGGATGTATTTTATGAGCGTGAGTTGATCAGGCCAATTGATTATGTACAGATGAACGTGCTGGCATTCAACAGGCAATTCCACTATGGTGTGTTTTATGCGTACACCAAGCTGAAGGAACAAGAAATGAGAAATGTCGTGTGGATAGCCGAATGCATTTCACAAAGACATCGAACTAAAATTAACAGTTACATTCCAATCTTATAA

Related Sequences

bmy_15817T0 Protein

Length: 249 aa      View alignments
>bmy_15817T0
MEAVNIAETPSDLFNAILVETPLAPFFQDCMSENTLDELNIEILRNKLYKSYIEAFYKFCKNHGDVTAEIMCPILEISSVPTGPLACNVNLHMHEGLRPEIRMFEADRRAFIITLNSFGTELSKEDRETLYPTCGKLYPEGLRLLAQAEDFEQMKRVADHYGVYKPLFEAVGDGSGGKTLEDVFYERELIRPIDYVQMNVLAFNRQFHYGVFYAYTKLKEQEMRNVVWIAECISQRHRTKINSYIPIL*