Part of scaffold_1206 (Scaffold)

For more information consult the page for scaffold_1206 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLCZ1 ENSTTRG00000002980 (Bottlenosed dolphin)

Gene Details

phospholipase C, zeta 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002795, Bottlenosed dolphin)

Protein Percentage 80.45%
cDNA percentage 84.49%
Ka/Ks Ratio 0.53109 (Ka = 0.1541, Ks = 0.2902)

PLCZ1 ENSBTAG00000013202 (Cow)

Gene Details

1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017574, Cow)

Protein Percentage 71.16%
cDNA percentage 79.79%
Ka/Ks Ratio 0.44829 (Ka = 0.2018, Ks = 0.4501)

PLCZ1  (Minke Whale)

Gene Details

phospholipase C, zeta 1

External Links

Gene match (Identifier: BACU016330, Minke Whale)

Protein Percentage 84.72%
cDNA percentage 88.21%
Ka/Ks Ratio 0.58055 (Ka = 0.1157, Ks = 0.1993)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1653 bp    Location:480837..440766   Strand:-
>bmy_15743
ATGGCATCGATGTATAATCAGGCCCTCAGAATAACTGTCCCCAACCCAATGGAAGCACGCTATGCTGAAAGAAAAGCGGCAGTGGCATCAGTGGATGAGTTTCAAGAAATCCCTCTCCTGCAAAGGGGCAGAGAGAAAGATGGCTTCATTACTCTTATTTTATGTTGTAAACTTTTCTACTCACCACCTCCCACCTGGATGGCATCTTCTCTCTTCCCTTACCTGCAGTTCTCCTTCTCCTCCCATCGATTTCAGTTTCCAAGTGCCCAAAACAAAGCTTTTGATAGAGGAAACCAACTAGGCAGGGACAAAACAGCAGACTATAATGAGCTCTATGGGATGGCATATGTCATCACCACAGATAATGACAGGCTGAAGCAAGGAAGAATCACCATAGAAGAATTTAGAAGAATTTATCGAATTATTGCACACAGAGAAGAAATTATTGAGATTTTCAACACGTATTCTGAAAACCAGAAATTTCTTTTTGAAAAGAATCTGGCCCAATTTTTGACACAAGAGCAGTATACACTTGACATTAATAAAAGTACTGCTTCTGAGATCATTCAAAAATATGAGCCTATTGAAGAAGTTAAACAAGCACACCAGATGTCATTTGAAGGTTTTACAAGATACATGGATTCGTCTGAATGTCTACTATTTAATAATAAGTATGAAAGTGTTTATCAAGATATGACTCATCCACTGAGTGATTATTTTATTTCAAGTTCACATAATACGTACTTGATATCTGACCAATTAGTGGGACCAAGTGACCTTTGGGGATATGTAAGTGCCCTTGTGAAAGGATGCCGTTGTCTGGAAATTGACTGCTGGGATGGATCACAAAATGAACCTGTTGTATACCATGGTTATACATTCACCAGCAAGCTTCTGTTTAAAACTGTTATCCGAGCGATACACAAATACGCATTCATAACATCTGACTACCCAGTGGTGCTCTCTTTAGAAAATCACTGCTCCCCTTCCCAACAAGAAGTGATGGCAGACAGTTTGCAGTCTACTTTTGGAGACGCCTTGCTTTCTGATATGCTTGATGATTTTCCAGACAAATTACCTTCACCAGAGGCATTAAAATTCAAAATATTAGTCAGAAACAAGAAAATAGGAACTTTAAGGGAAACCCGTGAAAGGAGAGGTTCTGATAAGCATGGTCAGGTAGAGGAATGTGAAGAAGAAGAGGAGGCAGAGCAAGAGGAGGAGGAAAATGAGGCCAAAGGACCAGAACCATCGGATGCTTTTCAAGACAATTTGGAAAAGGAGGCAGAGTCAAAAAGGGCAGTYGGAATTCCACTCTTCAAGAAAAAGAAGTTAAAAATAGCTATGGCCCTATCTGATCTTGTTATTTATACTAAAGCGGAGAAGTTCAGAAGTTTTCACCATTCAAGACTCTATCAACAATTTAATGAAAGTAACTCTATTGGGGAGTCACAAGCCCGAAAACTTTCAAAGCTGAGAGGTCACATTAAGTTTTATTTCACAGAACTCAACCATTACTTAAGTCATGAAATTTTGATTGAGAATGTCCAATTCATGAAAAGAGCTTCCTTTGAAGAATTTTCGACCCTGGGTGTTTTGGAGTCAAGCAATGATGAATCATTGGCTTCAAGGGTTGAAGTTATTCCTAAATAG

Related Sequences

bmy_15743T0 Protein

Length: 551 aa      View alignments
>bmy_15743T0
MASMYNQALRITVPNPMEARYAERKAAVASVDEFQEIPLLQRGREKDGFITLILCCKLFYSPPPTWMASSLFPYLQFSFSSHRFQFPSAQNKAFDRGNQLGRDKTADYNELYGMAYVITTDNDRLKQGRITIEEFRRIYRIIAHREEIIEIFNTYSENQKFLFEKNLAQFLTQEQYTLDINKSTASEIIQKYEPIEEVKQAHQMSFEGFTRYMDSSECLLFNNKYESVYQDMTHPLSDYFISSSHNTYLISDQLVGPSDLWGYVSALVKGCRCLEIDCWDGSQNEPVVYHGYTFTSKLLFKTVIRAIHKYAFITSDYPVVLSLENHCSPSQQEVMADSLQSTFGDALLSDMLDDFPDKLPSPEALKFKILVRNKKIGTLRETRERRGSDKHGQVEECEEEEEAEQEEEENEAKGPEPSDAFQDNLEKEAESKRAVGIPLFKKKKLKIAMALSDLVIYTKAEKFRSFHHSRLYQQFNESNSIGESQARKLSKLRGHIKFYFTELNHYLSHEILIENVQFMKRASFEEFSTLGVLESSNDESLASRVEVIPK*