Part of scaffold_1183 (SequenceType object (1))

For more information consult the page for scaffold_1183 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC2ENSTTRG00000008297 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007861, Bottlenosed dolphin)

Protein Percentage 83.18%
cDNA percentage 84.6%
Ka/Ks Ratio 0.26022 (Ka = 0.055, Ks = 0.2112)

ERCC2ENSBTAG00000002072 (Cow)

Gene Details

TFIIH basal transcription factor complex helicase XPD subunit

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002680, Cow)

Protein Percentage 98.01%
cDNA percentage 93.81%
Ka/Ks Ratio 0.01736 (Ka = 0.0082, Ks = 0.4701)

ERCC2 (Minke Whale)

Gene Details

excision repair cross-complementation group 2

External Links

Gene match (Identifier: BACU002110, Minke Whale)

Protein Percentage 98.77%
cDNA percentage 98.36%
Ka/Ks Ratio 0.0754 (Ka = 0.0056, Ks = 0.0748)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2517 bp    Location:493456..474481   Strand:-
>bmy_15594
TCGGTTCGACGGCAGGGGAGTGTGGAGGCCGGAGAGGGGCTGAGGGGACGGGGGACTGACCTGGCAGCTCCCGCCGCCAGGCTCAACGTGGACGGGCTGCTGGTCTACTTCCCATACGACTACATCTACCCGGAGCAGTTCTCCTACATGCTGGAGCTCAAACGCACGCTGGATGCCAAGGGTCATGGAGTCCTGGAGATGCCCTCAGGCACTGGGAAGACAGTGTCCCTGTTGGCCCTGATCATGGCGTACCAGCGGGTGATTGAAGAGCTTCGAAAGTTACTCAACTTCTATGAGAAACAGGAGGGCGAGAAGCTGTCGTTTTTGGGGCTGGCTCTGAGCTCCCGAAAGAACCTGTGCATTCATCCCGAGGTGACGCCCCTGCGCTTTGGGAAGGACGTCGACGGAAAATGCCACAGCCTCACGGCCTCCTACATAAGGGCACAGTACCAGCGGGACCCCAGCCTGCCCCACTGCCGCTTCTACGAGGAATTTGATGTCCATGGGCGCCAGGTGCCCCTCCCCGCTGGCATCTACAACCTGGACGACCTGAAGGCCGTGGGGCAGCGCCAGGGCTGGTGCCCATACTTCCTTGCCCGATACTCAATCCTGCACGCCAACGTGGTGGTCTACAGCTACCACTACCTCCTGGACCCCAAGATTGCCGACCTGGTGTCCAAGGAGCTGGCCCGCAAGGCCGTCGTCGTCTTCGACGAGGCCCACAACATTGACAATGTCTGCATCGACTCCATGAGTGTCAACCTCACCCGCCGGACCCTGGATCGGTGCCAGGGCAACCTGGAGACCCTGCAGAAGACGGTGCTGAGGATCAAGGAGACGGACGAGCAGCGTCTGCGGGATGAGTACCGGCGCCTGGTGGAGGGGCTGCGGGAGGCCAGCGCCGCCCGGGAGACCGACGCCCACCTGGCCAACCCCGTGCTGCCCGACGAGGTGCTGCAGGAGGCGGTGCCAGGCTCCATCCGCACGGCCGAGCACTTCCTGGGCTTCCTGCGGCGGCTGCTGGAGTACGTCAAGTGGCGGCTGCGCGTGCAGCACGTGGTGCAGGAGAGCCCACCCGCCTTCCTGAGCGGCCTGGCCCAGCGCGTGTGCATCCAGCGCAAGCCCCTCAGGTTCTGCGCCGAGCGCCTCCGCTCCCTCCTGCACACCTTGGAGATCGCGGACCTTGCTGACTTCTCCCCTCTCACCCTCCTGGCTAACTTCGCCACGCTCGTCAGCACCTACGCCAAGGGTTTCACCATCATCATTGAGCCCTTTGACGACAGGACCCCAACCATCGCCAACCCCATCCTGCACTTCAGCTGCATGGACGCCTCGTTGGCCATCAAACCCGTGTTCGAGCGCTTCCAGTCCGTCATCATCACATCTGGGACGCTGTCCCCGCTGGACATCTACCCCAAGATCCTGGACTTCCACCCCGTCACCATGGCAACCTTCACCATGACATTGGCTCGGGTCTGCCTCTGCCCCATGATGTCCGCTGTGGTGCCCGATGGCATCGTGGCCTTCTTTACCAGCTACCAGTACATGGAGAGCACCGTGGCCTCCTGGTACGAGCAGGGCATCCTCGAGAACATCCAGAGGAACAAGCTGCTCTTTATTGAGACCCAGGATGGGGCTGAGACCAGTGTGGCCCTGGAGAAGTACCAGGAGGTGGGTATTACYGGGGGAAGAGGAAAGTCCAGGGTGGAGAGGGGCCAGAGGAGGCAGCTCCGAGGTGACGCATCTCGTGTCCTGGCCTCCCCTCCCCAGGCCTGCGAGAACGGCCGTGGGGCCATCCTGCTCTCGGTGGCCCGAGGCAAAGTGTCTGAGGGAATTGACTTTGGTGAGTGGACTAGGCTCTCCCCTCCCCAAGCGCCTGCGTGGATGTCTGGCCATTTCTGCTCCCCCAGGGGACCAGCGGCCCACAGCCTGGGCACGCACGGGGCCTCCCCTTCCTTCCATCCCTGGGTGCTCTGCAGGGCCCTTGGGGCGCAGCCACTCAAACAGCATGAGCTCCCGGGCCACACGAGGTCAGCCCTCTCACTCCCCCTCCTCTGCCCCGCAGTTCACCACTACGGCCGGGCCGTCATCATGTTCGGGGTGCCCTACGTCTACACCCAGAGCCGCATTCTCAAGGCACGGCTGGAATACCTTCGGGACCAGTTCCAGATTCGAGAGAACGACTTTCTGACCTTCGATGCCATGCGCCACGCGGCCCAGTGTGTGGGTCGGGCCATCAGGGGCAAAACTGACTATGGCCTCATGGTCTTCGCCGACAAGCGGTTTGCCCGGGCCGACAAGCGGGGGAAACTGCCCCGCTGGATCCAGGAGCACCTCACCGACGCCAACCTCAACCTGACCGTTGACGAGGGGGTCCAGGTCGCCAAGTACTTCCTGAGGCAGATGGCACAGCCATTCCACCGGGAGGATCAGCTGGGCCTGTCCCTGCTCAGCCTGGAGCAGCTGGAGTCGGAGGAGGCGCTGCGGAGGATAGAGCAGATCGCTCAGCAGCTGTAG

Related Sequences

bmy_15594T0 SequenceType object (3)

Length: 839 aa      View alignments
>bmy_15594T0
SVRRQGSVEAGEGLRGRGTDLAAPAARLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRVIEELRKLLNFYEKQEGEKLSFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYIRAQYQRDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDLKAVGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEVGITGGRGKSRVERGQRRQLRGDASRVLASPPQACENGRGAILLSVARGKVSEGIDFGEWTRLSPPQAPAWMSGHFCSPRGPAAHSLGTHGASPSFHPWVLCRALGAQPLKQHELPGHTRSALSLPLLCPAVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHREDQLGLSLLSLEQLESEEALRRIEQIAQQL*