Part of scaffold_1030 (Scaffold)

For more information consult the page for scaffold_1030 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIAH2 ENSTTRG00000007524 (Bottlenosed dolphin)

Gene Details

siah E3 ubiquitin protein ligase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007116, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 97.48%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1282)

SIAH2 ENSBTAG00000023445 (Cow)

Gene Details

E3 ubiquitin-protein ligase SIAH2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041904, Cow)

Protein Percentage 81.4%
cDNA percentage 81.27%
Ka/Ks Ratio 0.20947 (Ka = 0.135, Ks = 0.6445)

SIAH2  (Minke Whale)

Gene Details

siah E3 ubiquitin protein ligase 2

External Links

Gene match (Identifier: BACU012809, Minke Whale)

Protein Percentage 96.46%
cDNA percentage 96.63%
Ka/Ks Ratio 0.21072 (Ka = 0.0216, Ks = 0.1025)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 729 bp    Location:657140..652263   Strand:-
>bmy_14739
ATGGATGTGTCCCAGGCTGCAGACAGCCCTCTGCGAAGCAGCCCAGGTGCTTTATCTCAGGAACAAGAGCGTGCAGTGAAGAAGCGGGCGTCTCAAGGAAAGCGGGCATCCTTTGAACCCTCCCCTTGGTCCGTGGTTTTAAAAGATGAATACACAATTCCTACGGGCAAATACGCCACCACGGGCTGTTCCCTGACCCTGCACCACACGGAAAAGCCGGAGCACGAAGACATCTGTGAATACCGCCCCTACTCTTGCCCTTGTCCCGGTGCTTCCTGCAAGTGGCAGGGGTCCCTGGAAGCCGTGATGTCCCATCTCATGCACGCCCACAAGAGCATCACCACCCTTCAGGGAGAAGACATCGTCTTCCTGGCCACAGACATTAACTTGCCGGGGGCCGTGGACTGGGTAATGATGCAGTCATGTTTCGGCCATCACTTCATGCTGGTGCTGGAGAAGCAAGAGAAGTACGAGGGCCACCAGCAGTTCTTCGCCATCGTTCTGCTCATCGGCACCCGCAAGCAGGCGGAGAACTTCGCCTACAGACTGGAATTGAACGGGAACCGGAGGAGACTGACCTGGGAGGCCACGCCCCGGTCCATCCACGACGGCGTGTCCTCGGCCATCATGAACAGCGACTGCCTGGTGTTCGACACAGCCATAGCGCATCTCTTTGCAGATAATGGGAACCTTGGAATCAATGTGACTATTTCTACGTGTTGTCCGTGA

Related Sequences

bmy_14739T0 Protein

Length: 243 aa      View alignments
>bmy_14739T0
MDVSQAADSPLRSSPGALSQEQERAVKKRASQGKRASFEPSPWSVVLKDEYTIPTGKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVSSAIMNSDCLVFDTAIAHLFADNGNLGINVTISTCCP*