Part of scaffold_1030 (Scaffold)

For more information consult the page for scaffold_1030 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSC22D2 ENSTTRG00000007519 (Bottlenosed dolphin)

Gene Details

TSC22 domain family, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007111, Bottlenosed dolphin)

Protein Percentage 97.02%
cDNA percentage 97.75%
Ka/Ks Ratio 0.44058 (Ka = 0.0166, Ks = 0.0378)

BT.70150 ENSBTAG00000018402 (Cow)

Gene Details

TSC22 domain family protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024485, Cow)

Protein Percentage 91.74%
cDNA percentage 93.12%
Ka/Ks Ratio 0.29323 (Ka = 0.0443, Ks = 0.1512)

TSC22D2  (Minke Whale)

Gene Details

TSC22 domain family, member 2

External Links

Gene match (Identifier: BACU019322, Minke Whale)

Protein Percentage 99.77%
cDNA percentage 99.69%
Ka/Ks Ratio 0.14543 (Ka = 0.0011, Ks = 0.0078)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2292 bp    Location:374841..421942   Strand:+
>bmy_14734
ATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCTTCCAGATCACCAGTGTCACCACGGCCCAGGTGGCCACTAGCATCACCGAGGACACCGAGAGCCTGGACGATCCGGACGAGTCACGCACAGAGGACGTCTCCTCCGAGATATTCGACGTTTCTCGGGCCACGGATTACGGCCCCGAGGAGGTCTGCGAGCGCAGTTCCTCCGAAGAGACGCTCAACAATGTTGGGGATGCGGAGACTCCCGGTACCGTCTCCCCCAACCTCGTCCTGGACGGACAGCTGGCGGCCGCGGCGGCCACTCCCGCCAACGGAGGAGGAGCCGCTTCGGCCCGCAGCGTGGCTGGGGCGCTGGCCAGTACCCTAGCGGCGGCCGCCACCTCGGCCCCCTCCCCGGGGGCCCCCGGAGCACCCCCGGTCGCGGGCCCCTCCGCCGGGCCAGGGACTGCCGCCCCCTCGCAGCCCCCCACCACTTGTAGTTCCCGTTTCCGCGTGATCAAGCTGGACCACGGCAGCGGGGAGCCGTATAGACGCGGCCGATGGACGTGCATGGAATACTATGAGCGGGATTCCGACAGCAGCGTCCTGACGCGGTCCGGGGATTGCATTAGACACAGCAATACTTTTGATCAGACTGCGGATCGGGACAGCGGCCTGGGCGCCACCGGAGGGTCCGTGGTGGTGGTGGTGGCCTCCATGCCGGGGGCGCACGGACCCGACTCGGGAACTGACAGTTCCTTGACTGCTGTGTCACAGCTACCCCCGTCGGAGAAAATGAGCCAGCCCGCCCCGGCCCCGCCGCAGAGTTTTGGCGTTGGGCAGCCGCAGCCGCAGCCGCCGCCCGTAGGTGGGGCTGTGGCTCCGAGCTCGGCTCCGCTGCCGCCGTTCCCGGGAGCCGCGGCCGGGCCGCCGCAGATGATGGCAGCCCCGCCGCCCAGCCAGCCTCAGGGCGCCGCGCCTGGCTCCGTCCCCCCGGGGCCCAACGGACAGGGCCTGCCGCTGACGAATGTAACCCTGGCGCAGCCCGGCCTGGCCCTGCCTCCGCAGCCCGGCCCGGCCGTGGGCGCTTCTGCCGCGCCGCCGCCCCAGCAGTTCGCGTATCCCCAGGCTCAGATTCCGCCGGGCCATCTGCTGCCCGTCCAGCCCGCCGGCCAGAGTGAGTACCTGCAGCCGCACGTGGCCGGCCTGCAGCCGCCCAGCCCGGCGCAGCCCTCGTCCGCGGGCGCCGGAGCGGGCCCCGCCGCGTCGGCCGGCCTCCCCGCGGGCCCCGGCCAGAACGCCTCCTCCACGGGCGCGCAGATTATGGGCGCGGCCTCCCTGCCTGGCGAAGCCGTGGCCCCGGGGCCGGGCCCCGCGCAGGGCGGACCGGCCGCCGCCGGTCAGCCGGCCGGAGTGCCCCCGGCTGCCGTGGGAGGCGCGGCGCAGTCGGGCCTGGTTCCCGCCGGGGCCGGGCAGCCGCAGCCCGCGCCTCCGCCGCAGATGGGCGGCAGCGGCACGCCATCGGCAGTGCCCGGCGGCCCTCACGCCGTGGTGCCCGGAGTTCCGAACGTGCCTGCAGCCGCGCCCGCTCCCAGCGTGCCTAGTGTGTCTACCACTTCTGTTACTATGCCAAATGTACCCGCGCCCTTGGCCCAGGCGCAGCAGCTGAGCAGCCATCCTCCGGTCAGCAGGAGCGGCAGCATCATCCAGCACGTGGGGCTGCCCTTAGCGCCAGGCACGGCCAGTGCACCGACGAGTCTACCGCAGTCTGACCTAAGCCAGTTTCAGACTCAGACCCAGCCTTTAGTCGGGCAAGTTGACGATACTAGAAGAAAATCCGAACCCCTACCTCAACCACCACTTTCTCTCATTGCTGAAACTAAGCCTGTTGTGAAGCCTCCTGTTGCAGATGCCCTGGCAAACCCCCTTCAGTTAACACCTATGAACAGTCTCTCCACCTCTGTATTCAGCATAGCTATTCCTGTTGATGGTGATGAAGACAGTGCATCTGGGGGAGGTGGTGTAGCCATTGACAACAAAATAGAACAAGCAATGGATCTGGTGAAAAGCCATTTGATGTATGCAGTAAGAGAAGAAGTGGAAGTTCTAAAGGAACAAATAAAAGAATTAGTTGAAAGAAACTCTTTACTTGAACGAGAAAATGCACTGTTAAAATCTCTTTCAAACAATGATCAGTTATCCCAACTCCCAGCCCAACAGGCCAATGCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAGCCTCCGCAGCAGCCGAATGTGTCCTCAGCATAA

Related Sequences

bmy_14734T0 Protein

Length: 764 aa      View alignments
>bmy_14734T0
MSKMPAKKKSCFQITSVTTAQVATSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPEEVCERSSSEETLNNVGDAETPGTVSPNLVLDGQLAAAAATPANGGGAASARSVAGALASTLAAAATSAPSPGAPGAPPVAGPSAGPGTAAPSQPPTTCSSRFRVIKLDHGSGEPYRRGRWTCMEYYERDSDSSVLTRSGDCIRHSNTFDQTADRDSGLGATGGSVVVVVASMPGAHGPDSGTDSSLTAVSQLPPSEKMSQPAPAPPQSFGVGQPQPQPPPVGGAVAPSSAPLPPFPGAAAGPPQMMAAPPPSQPQGAAPGSVPPGPNGQGLPLTNVTLAQPGLALPPQPGPAVGASAAPPPQQFAYPQAQIPPGHLLPVQPAGQSEYLQPHVAGLQPPSPAQPSSAGAGAGPAASAGLPAGPGQNASSTGAQIMGAASLPGEAVAPGPGPAQGGPAAAGQPAGVPPAAVGGAAQSGLVPAGAGQPQPAPPPQMGGSGTPSAVPGGPHAVVPGVPNVPAAAPAPSVPSVSTTSVTMPNVPAPLAQAQQLSSHPPVSRSGSIIQHVGLPLAPGTASAPTSLPQSDLSQFQTQTQPLVGQVDDTRRKSEPLPQPPLSLIAETKPVVKPPVADALANPLQLTPMNSLSTSVFSIAIPVDGDEDSASGGGGVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLPAQQANAGSTSQQQAVIAQPPQPTQPPQQPNVSSA*