Part of scaffold_998 (Scaffold)

For more information consult the page for scaffold_998 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA3 ENSTTRG00000013526 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012832, Bottlenosed dolphin)

Protein Percentage 81.57%
cDNA percentage 81.05%
Ka/Ks Ratio 0.06444 (Ka = 0.0022, Ks = 0.034)

PSMA3 ENSBTAG00000002808 (Cow)

Gene Details

Proteasome subunit alpha type-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003636, Cow)

Protein Percentage 99.22%
cDNA percentage 96.21%
Ka/Ks Ratio 0.01049 (Ka = 0.0018, Ks = 0.1671)

PSMA3  (Minke Whale)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 3

External Links

Gene match (Identifier: BACU013995, Minke Whale)

Protein Percentage 99.28%
cDNA percentage 99.76%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0101)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 768 bp    Location:530944..506732   Strand:-
>bmy_14453
ATGAGCTCAATCGGCACCGGGTATGACCTGTCAGCCTCTACATTCTCTCCTGATGGAAGAGTTTTTCAAGTTGAGTATGCTATGAAGGCTGTGGAAAATAGTAGTACAGCTATTGGAATCAGATGTAAAGATGGCGTTGTCTTTGGGGTAGAAAAATTAGTCCTTTCTAAACTTTATGAAGAAGGTTCTAACAAACGACTTTTTAATGTCGATCGGCATGTTGGAATGGCAGTAGCAGGTTTGTTGGCAGATGCTCGTTCTTTAGCAGACATTGCGAGAGAAGAGGCTTCCAACTTTAGATCTAACTTTGGATATAACATTCCACTAAAACATCTTGCAGACAGAGTGGCCATGTATGTACATGCCTATACACTCTACAGTGCTGTTAGACCTTTTGGCTGCAGTTTCATGTTAGGGTCTTACAGTGTGAATGRTGGTGCACAACTCTACATGATTGACCCATCGGGTGTTTCATATGGTTATTGGGGCTGTGCCATTGGCAAAGCCAGACAAGCTGCAAAGACAGAAATCGAAAAGCTTCAGATGAAAGAAATGACCTGCCGTGATGTTGTTAAAGAAGTTGCAAAAATAATTTACATAGTACATGATGAAGTTAAGGATAAAGCTTTTGAACTAGAGCTCAGCTGGGTTGGTGAAATAACTAACGGAAGACATGAAATTGTTCCAAAAGATATAAGGGAAGAGGCAGAGAAATATGCCAAGGAATCTTTGAAGGAAGAAGACGAATCAGATGATGATAACATGTAA

Related Sequences

bmy_14453T0 Protein

Length: 256 aa      View alignments
>bmy_14453T0
MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNXGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGEITNGRHEIVPKDIREEAEKYAKESLKEEDESDDDNM*