Part of scaffold_961 (Scaffold)

For more information consult the page for scaffold_961 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNGAP1 ENSTTRG00000006926 (Bottlenosed dolphin)

Gene Details

synaptic Ras GTPase activating protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006550, Bottlenosed dolphin)

Protein Percentage 88.56%
cDNA percentage 88.51%
Ka/Ks Ratio 0.21802 (Ka = 0.0155, Ks = 0.0709)

SYNGAP1 ENSBTAG00000020975 (Cow)

Gene Details

ras GTPase-activating protein SynGAP

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027936, Cow)

Protein Percentage 97.92%
cDNA percentage 94.1%
Ka/Ks Ratio 0.04462 (Ka = 0.0124, Ks = 0.2783)

SYNGAP1  (Minke Whale)

Gene Details

synaptic Ras GTPase activating protein 1

External Links

Gene match (Identifier: BACU012221, Minke Whale)

Protein Percentage 97.68%
cDNA percentage 97.42%
Ka/Ks Ratio 0.20013 (Ka = 0.014, Ks = 0.0698)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4155 bp    Location:387448..415046   Strand:+
>bmy_14339
ATGATAGAGAAGCTTATCTTCTGTTCCTGTAAAGTTACCGAGGGCCTCACCCCCATCTGTGATCTCCTCAAGGCGGGTGGGTTCCCCTTCTGCCCCTTTATGGACTCTCTTCTTGCCATTTTAGACACCTCTGTCTCCCAAATACATAGAGCCTCCCTTACCGTTTCTGTGTGTCTCTGCCCCCTAGATGTACGGGGACCCCCTATGCACCGAACCCAATACGTTCATTCCCCATATGATCGTCCTGGTTGGAACCCTCGGTTCTGCATCATCTCGGGGAACCAGCTTCTCATGCTGGATGAGGACGAGATACACCCCCTTCTGATCCGGGACCGGAGGAGCGAGTCCAGTCGCAACAAACTGCTGAGACGCACAGTCTCCGTGCCGGTGGAGGGGCGGCCCCACGGCGAGCATGAATACCACTTGGGTCGCTCGAGGAGGAAGAGCGTCCCAGGGGGGAAGCAGTACAGCATGGAGGCCGCCCCCGCTGCACCCTTTCGGCCCTCGCAAGGCTTCCTGAGCCGGAGGCTAAAAAGCTCCATCAAACGTACGAAGTCACAACCCAAACTTGACCGGACCAGCAGCTTTCGCCAGATACTGCCTCGCTTCCGAAGTGCTGACCATGACCGGGCCCGGCTGATGCAGAGCTTTAAGGAGTCGCACTCTCACGAGTCCTTGCTGAGTCCTAGCAGTGCGGCCGAGGCCTTGGAGCTCAACCTGGATGAAGATTCCATTATCAAGCCAGTGCACAGCTCCATCCTGGGCCAGGAGTTCTGTTTTGAGGTAACAACATCATCAGGAACAAAATGTTTTGCCTGTCGTTCTGCGGCCGAAAGGGACAAATGGATCGAGAATCTACAGCGGGCGGTAAAACCCAACAAGGACAACAGCCGCCGGGTGGACAACGTGTTGAAGCTGTGGATCATAGAGGCGCGGGAACTGCCCCCCAAGAAGCGGTACTATTGCGAGCTCTGCCTGGATGATATGCTGTATGCACGCACCACCTCCAAGCCCCGCTCGGCCTCGGGGGACACCGTCTTCTGGGGCGAGCACTTCGAGTTCAACAACCTGCCGGCCGTCCGGGCCCTGCGGCTGCACCTGTACCGTGACTCAGACAAAAAGCGCAAGAAGGACAAGGCGGGCTATGTCGGCCTGGTGACTGTGCCTGTGGCCACCCTGGCTGGGCGCCACTTCACAGAGCAGTGGTACCCCGTGACCCTGCCGACAGGCAGTGGGGGCTCCGGGGGCATGGGGGGCTCGGGAGGGGGAGGGGGCTCAGGGGGTGGCTCAGGGGGCAAGGGCAAAGGAGGTTGCCCGGCTGTGCGGCTGAAAGCGCGTTACCAGACAATGAGCATCCTGCCCATGGAGCTGTATAAGGAGTTTGCAGAGTATGTCACCAACCATTATCGGATGCTGTGTGCGGTGTTGGAGCCCGCCCTGAATGTCAAGGGCAAGGAGGAGGTCGCCAGCGCGCTGGTTCACATCCTGCAGAGTACGGGCAAGGCCAAGGACTTCCTTTCAGACATGGCCATGTCCGAGGTGGACCGGTTCATGGAACGGGAGCACCTCATATTCCGCGAGAACACTCTCGCCACTAAAGCCATAGAAGAGTACATGAGACTGATTGGTCAGAAATACCTCAAGGATGCCATCGGGGAATTCATCCGTGCTCTGTATGAATCTGAGGAGAACTGTGAGGTGGACCCCATCAAGTGCACGGCGTCCAGTCTGGCAGAGCACCAGGCCAACCTGCGGATGTGCTGTGAGTTGGCCCTGTGCAAGGTGGTCAACTCCCATTGCGTGTTCCCGAGGGAGCTGAAGGAGGTGTTTGCGTCTTGGCGGCTGCGCTGCGCAGAGAGGGGCCGGGAGGACATCGCAGACCGGCTGATCAGCGCCTCGCTCTTCCTGCGCTTCCTCTGCCCGGCCATCATGTCACCCAGTCTCTTTGGGCTCATGCAGGAGTACCCAGATGAGCAGACCTCGCGAACCCTCACCCTCATCGCCAAGGTCATCCAGAACCTGGCCAACTTTTCCAAGTTTACCTCAAAGGAGGACTTTCTGGGCTTCATGAATGAGTTTCTGGAGCTGGAGTGGGGTTCCATGCAGCAGTTCCTGTACGAGATCTCCAACTTGGACACACTGACCAATAGCAGTAGCTTTGAGGGTTACATCGACCTGGGCCGAGAGCTCTCCACGCTGCACGCCCTGCTCTGGGAGGTGCTGCCCCAGCTCAGCAAGGAAGCCCTCCTGAAGCTGGGCCCACTGCCCCGGCTCCTCAACGACATCAGCACAGCTCTGAGGAATCCCAACATCCAACGGCAGCCGAGCCGTCAGAGCGAGCGGCCCCGGCCTCAGCCTGTGGTGCTGCGGGGCCCTTCGGCCGAGATGCAGGGCTACGTGATGCGGGACCTCAACAGCTCCATCGACCTTCAGTCCTTCATGGCTCGAGGCCTCAACAGCTCTATGGACATGGCTCGCCTCCCCTCCCCAACCAAGGAAAAGCCCCCCCCACCGCCGCCTGGTGGGGGGAAAGACCTGTTCTATGTCAGCCGCCCACCCCTGGCCCGGTCCTCACCTGCGTACTGCACGAGCAGCTCGGACATCACAGAACCGGAGCAGAAGATGCTGAGTGTCAACAAGAGCGTCTCCATGCTGGACCTGCAGGGTGACGGGCCCGGTGGCCGCCTCAACAGCAGCAGTGTGTCCAACCTGGCAGCCGTCGGGGACCTGCTGCACTCGAGCCAGGCCTCCCTGACTGCGGCCTTGGGGCTGCGGCCCGCGCCTGCAGGCCGCCTCTCCCAGGGGAGCGGCTCATCCATCACGGCGGCCGGCATGCGTCTCAGCCAGATGGGCGTCACCACGGACGGTGTCCCTGCCCAGCAACTGCGCATACCCCTCTCCTTCCAGAATCCTCTCTTCCACATGGCTGCTGATGGGCCAGGCCCCCCAGGGGGCCACGGAGGGGGCGGAGGCCACGGTCCACCCTCCTCCCATCACCACCATCACCACCATCACCACCACCGAGGTGGAGAGCCCCCAGGGGACACCTTCGCCCCATTCCATGGCTATAGCAAGAGCGAGGACCTCTCCTCAGGGGTCCCCAAGCCCCCCGCTGCTTCCATCCTCCACAGCCACAGCTACAGTGATGAGTTTGGACCCTCTGGCACTGACTTCACCCGTCGGCAGCTCTCACTCCAGGACAACCTGCAGCACATGCTGTCTCCTCCCCAGATCACCATTGGTCCCCAGAGGCCCGTTCCCCCAGGGCCTGGAGGTGGGAGCGGCGGTGGGGGCAGCGGCGGGGGTGGCGGGGGCCAGCCGCCTCCGTTGCAGAGGGGCAAGTCTCAGCAGTTGACAGTCAGCGCTGCCCAGAAACCCCGGCCGTCCAGCGGGAACCTGTTGCAGTCGCCGGAGCCAAGTTATGGCCCTGCCCGTCCGCGGCAACAGAGCCTCAGCAAAGAAGGCAGCATTGGGGGCAGTGGGGGCAGCGGCGGCGGAGGGGGTGGGGGGCTCAAGCCCTCCATCACCAAGCAGCATTCTCAGGCGCCATCCACGCTGAACCCCACGATGCCAGCCTCCGAGCGGACGGTGGCCTGGGTCTCCAACATGCCTCATCTGTCAGCTGACATCGAGAGCGCCCACATCGAGCGGGAAGAGTACAAGCTCAAGGAATACTCGAAGTCCATGGACGAGAGCCGGCTGGATAGGGTGAAGGAGTATGAGGAGGAGATCCACTCGCTGAAGGAGCGGCTGCACATGTCCAATCGGAAGCTGGAAGAGTATGAGCGGAGGCTGCTGTCCCAGGAAGAACAGACCAGCAAAATCCTGATGCAGTATCAGGCCCGGCTGGAACAGAGTGAGAAGAGGCTAAGGCAGCAGCAGGCAGAGAAGGACTCACAGATCAAGAGCATCATTGGCAGGCTGATGCTGGTGGAGGAGGAGCTGCGCCGGGAGCACCCCGCCATGGCTGAGCCGCTGCCCGAACCCAAGAAGAGGCTGCTCGACGCTCAGGAGAGGCAGCTTCCCCCCTTGGGTCCAACAAACCCGCGTGTGACGCTGGCCCCACCTTGGAACGGCCTGGCCCCCCCAGCCCCACCTCCCCCACCCCGGCTGCAGATCACCGAGAACGGCGAGTTCCGAAACACCGCAGACCAC

Related Sequences

bmy_14339T0 Protein

Length: 1385 aa      View alignments
>bmy_14339T0
MIEKLIFCSCKVTEGLTPICDLLKAGGFPFCPFMDSLLAILDTSVSQIHRASLTVSVCLCPLDVRGPPMHRTQYVHSPYDRPGWNPRFCIISGNQLLMLDEDEIHPLLIRDRRSESSRNKLLRRTVSVPVEGRPHGEHEYHLGRSRRKSVPGGKQYSMEAAPAAPFRPSQGFLSRRLKSSIKRTKSQPKLDRTSSFRQILPRFRSADHDRARLMQSFKESHSHESLLSPSSAAEALELNLDEDSIIKPVHSSILGQEFCFEVTTSSGTKCFACRSAAERDKWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILPMELYKEFAEYVTNHYRMLCAVLEPALNVKGKEEVASALVHILQSTGKAKDFLSDMAMSEVDRFMEREHLIFRENTLATKAIEEYMRLIGQKYLKDAIGEFIRALYESEENCEVDPIKCTASSLAEHQANLRMCCELALCKVVNSHCVFPRELKEVFASWRLRCAERGREDIADRLISASLFLRFLCPAIMSPSLFGLMQEYPDEQTSRTLTLIAKVIQNLANFSKFTSKEDFLGFMNEFLELEWGSMQQFLYEISNLDTLTNSSSFEGYIDLGRELSTLHALLWEVLPQLSKEALLKLGPLPRLLNDISTALRNPNIQRQPSRQSERPRPQPVVLRGPSAEMQGYVMRDLNSSIDLQSFMARGLNSSMDMARLPSPTKEKPPPPPPGGGKDLFYVSRPPLARSSPAYCTSSSDITEPEQKMLSVNKSVSMLDLQGDGPGGRLNSSSVSNLAAVGDLLHSSQASLTAALGLRPAPAGRLSQGSGSSITAAGMRLSQMGVTTDGVPAQQLRIPLSFQNPLFHMAADGPGPPGGHGGGGGHGPPSSHHHHHHHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPPAASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHMLSPPQITIGPQRPVPPGPGGGSGGGGSGGGGGGQPPPLQRGKSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGGGGGGLKPSITKQHSQAPSTLNPTMPASERTVAWVSNMPHLSADIESAHIEREEYKLKEYSKSMDESRLDRVKEYEEEIHSLKERLHMSNRKLEEYERRLLSQEEQTSKILMQYQARLEQSEKRLRQQQAEKDSQIKSIIGRLMLVEEELRREHPAMAEPLPEPKKRLLDAQERQLPPLGPTNPRVTLAPPWNGLAPPAPPPPPRLQITENGEFRNTADH