Sequence details bmy_14157 (Coding sequence)

Part of scaffold_938 (Scaffold)

For more information consult the page for scaffold_938 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CXCL12 ENSTTRG00000008397 (Bottlenosed dolphin)

Gene Details

chemokine (C-X-C motif) ligand 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007956, Bottlenosed dolphin)

Protein Percentage 97.3%
cDNA percentage 98.2%
Ka/Ks Ratio 0.14805 (Ka = 0.0061, Ks = 0.041)

CXCL12 ENSBTAG00000005077 (Cow)

Gene Details

stromal cell-derived factor 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031235, Cow)

Protein Percentage 89.19%
cDNA percentage 93.69%
Ka/Ks Ratio 0.41077 (Ka = 0.0511, Ks = 0.1245)

Additional orthologs identified in other species via the OPTIC pipeline.

CXCL12 (Human)   Cxcl12 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 225 bp    Location:317819..311163   Strand:-
Raw sequence 
>bmy_14157
ATGGATGCCAAGATCGTCGCTGTGCTGGCCCTCGTGCTGGCTGCGCTGTGCCTCAGCGACGGGAAACCGGTCAGCCTGAGCTACAGATGCCCTTGCCGATTCTTTGAGAGCCATGTCGCCAGAGCCAATGTCAAGCATCTCAAAATCCTCAACACTCCGAATTTGTGCATCGACCCGAAATTGAAGTGGATTCAGGAATACCTGGAGAAAGCTTTAAACAAGTAA

Related Sequences

bmy_14157T0 Protein

Length: 75 aa      View alignments
>bmy_14157T0
MDAKIVAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNLCIDPKLKWIQEYLEKALNK*