Part of scaffold_956 (Scaffold)

For more information consult the page for scaffold_956 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

U2AF1 ENSTTRG00000009955 (Bottlenosed dolphin)

Gene Details

U2 small nuclear RNA auxiliary factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009438, Bottlenosed dolphin)

Protein Percentage 80.77%
cDNA percentage 80.95%
Ka/Ks Ratio 0.37817 (Ka = 0.0211, Ks = 0.0559)

U2AF1 ENSBTAG00000011645 (Cow)

Gene Details

Splicing factor U2AF 35 kDa subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015465, Cow)

Protein Percentage 98.25%
cDNA percentage 93.42%
Ka/Ks Ratio 0.05143 (Ka = 0.0139, Ks = 0.2704)

U2AF1  (Minke Whale)

Gene Details

U2 small nuclear RNA auxiliary factor 1

External Links

Gene match (Identifier: BACU004386, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.51%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0667)

Genome Location

Sequence Coding sequence

Length: 693 bp    Location:60193..69394   Strand:+
>bmy_14089
CTTATTTTCCCTTACAGAGTCAACTGTTCATTTTATTTCAAAATTGGAGCATGTCGTCATGGAGACAGATGCTCTCGGTTGCACAATAAACCGACCTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGCTGTGAGCGATGTCGAGATGCAGGAACACTATGATGAGTTTTTTGAGGAGGTTTTCACAGAAATGGAGGAGAAGTACGGGGAGGTGGAGGAGATGAACGTCTGCGACAACCTCGGAGATCACCTCGTTGGGAACGTGTATGTCAAGTTTCGCCGTGAAGAAGATGCGGAAAAGGCCGTGATTGACCTGAACAACCGCTGGTTTAATGGCCAGCCGATCCACGCCGAGCTCTCCCCTGTGACCGACTTCAGAGAAGCCTGCTGCCGCCAGTACGAGATGGGGGAGTGCACGCGGGGAGGCTTCTGCAACTTCATGCACCTGAAGCCCATCTCTCGGGAGCTGCGGCGGGAGTTGTACGGGCGCCGCCGTAAGAAGCATAGATCGCGGTCCCGCTCTCGGGAGCGTCGCTCTCGGTCTCGAGACCGTGGCCGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGGGGACGGGAGCGCGACAGGAGGCGGTCGAGAGACCGAGAGAGATCTGGGCGGTTCTGA

Related Sequences

bmy_14089T0 Protein

Length: 231 aa      View alignments
>bmy_14089T0
LIFPYRVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGRERDRRRSRDRERSGRF*