Part of scaffold_933 (Scaffold)

For more information consult the page for scaffold_933 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VAPA ENSTTRG00000010219 (Bottlenosed dolphin)

Gene Details

VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009691, Bottlenosed dolphin)

Protein Percentage 86.52%
cDNA percentage 88.76%
Ka/Ks Ratio 0.55998 (Ka = 0.1047, Ks = 0.187)

VAPA ENSBTAG00000017279 (Cow)

Gene Details

Vesicle-associated membrane protein-associated protein A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022970, Cow)

Protein Percentage 88.76%
cDNA percentage 87.42%
Ka/Ks Ratio 0.19097 (Ka = 0.0729, Ks = 0.3817)

VAPA  (Minke Whale)

Gene Details

VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa

External Links

Gene match (Identifier: BACU017060, Minke Whale)

Protein Percentage 83.8%
cDNA percentage 86.38%
Ka/Ks Ratio 0.66418 (Ka = 0.1363, Ks = 0.2052)

Genome Location

Sequence Coding sequence

Length: 1140 bp    Location:139673..114183   Strand:-
>bmy_14052
ATGAAGAAGAAAATAAAACTCCTTTGTGAGTGTACACCTGGAGGTATATTTAGGTACACAGACTTTCAGTACATACTCTATATAAAATTGAGGTTATGTGCATCCAGTTTTGAATTCTGCTTGTGTGTGTGTGTGAATCCAATTAAAATTTTTTTCCCCTGTTTTTGGTTTTTAAACCTTACAGGCCCCTTCACAGATGTAGTCACTACAAATCTTAAGTTGCGAAATCCATCGGATAGAAAGGTGTGTTTCAAAGTGAAGACTACAGCACCTCGTCGGTACTGTGTGAGGCCCAACAGTGGAATTATTGACCCAGGGTTGACTGTGACTGTTTCAGTAATGCTGCAGCCTTTTGACTATGACCCCAATGAGAAGAGTAAACACAAGTTTATGGTACAGACCATCTTTGCTCCACCAAACATTTCAGATATGGAAGCCGTGTGGAAAGAGGCAAAACCCGATGAATTGATGGATTCTAAATTGAGATGTGTATTTGAGATGCCCAATGAAAATGATAAATTGGAGGAACTTGAAGGGGTATCGCTCCGCCAGGGCCGGCCCTGGCTGTCGCTCCGCCAAGCAGCATCAACAGCACAGTCGCAGCACCTGCCAGTTATAGCGCGAAGAATGAGCCCAGGGGACTCAGTGTGTTCAAACAGGAGAAACAGAAGTACAAATAATAGTAACCCTTCTTTAACTGTCATTGTTAGTTATTTACAGTGCCCCGGGTTATTTACTTCTGGGAATCATGATCCTAGAGAAAAAGATCAGTTGAAAAACGCCCCGCCCGCTGTCTTTGTGCTGCAGAACGACATGGAACCCAGCAAAGCCGTTCCCCTGAATGCTGCGAAGCAGGACGGGCCCGTGCCAAAGCCACACAGTGTTTCCCTCAATGATACTGAGACGAGAAAGCTCATGGAAGAGTGCAAGAGGCTCCAGGGAGAGATGATGAAGCTATCGGAAGAAAACCGACACCTGAGAGATGAAGGCTTAAGGCTCAGAAAGGTAGCACATTCGGATAAACCTGGATCCMCCTCAGCTGCATCCTTCAGAGATAATGTCACCAGTCCTCTTCCTTCACTTCTTGTTGTAATTGCAGCCATTTTCATTGGATTCTTTCTAGGGAAATTCATCTTGTAG

Related Sequences

bmy_14052T0 Protein

Length: 380 aa      View alignments
>bmy_14052T0
MKKKIKLLCECTPGGIFRYTDFQYILYIKLRLCASSFEFCLCVCVNPIKIFFPCFWFLNLTGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLEELEGVSLRQGRPWLSLRQAASTAQSQHLPVIARRMSPGDSVCSNRRNRSTNNSNPSLTVIVSYLQCPGLFTSGNHDPREKDQLKNAPPAVFVLQNDMEPSKAVPLNAAKQDGPVPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSXSAASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL*