Part of scaffold_947 (Scaffold)

For more information consult the page for scaffold_947 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHANK1 ENSTTRG00000012893 (Bottlenosed dolphin)

Gene Details

SH3 and multiple ankyrin repeat domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012237, Bottlenosed dolphin)

Protein Percentage 79.36%
cDNA percentage 79.34%
Ka/Ks Ratio 0.14276 (Ka = 0.011, Ks = 0.0769)

SHANK1 ENSBTAG00000013107 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000046968, Cow)

Protein Percentage 93.58%
cDNA percentage 91.13%
Ka/Ks Ratio 0.07117 (Ka = 0.0197, Ks = 0.2763)

SHANK1  (Minke Whale)

Gene Details

SH3 and multiple ankyrin repeat domains 1

External Links

Gene match (Identifier: BACU008279, Minke Whale)

Protein Percentage 95.44%
cDNA percentage 96.14%
Ka/Ks Ratio 0.42561 (Ka = 0.0301, Ks = 0.0706)

Genome Location

Sequence Coding sequence

Length: 6531 bp    Location:416126..372896   Strand:-
>bmy_14016
ATGATGACCCACAGCCCCGCGTCAAGCGAGGACGAGGAACGCCACAGTGCCAGCGAGTGTCCCGAGGGGGGCTCAGAATCCGACAGCTCCCCAGACGGGCCAGGGAGAGGCCCCCGGGGGACCCGGGGCCGGGGCAGCGGGGGACCTGGTAGCCTGGCCTCGGTTCGAGGCCTCCAGGGCCGCTCCATGTCTGTCCCAGACGACGCCCACTTCAGCATGATGGTCTTTAGGATTGGCATCCCTGACCTGCACCAAACAAAATGCCTGCGCTTCAACCCAGATGCCACCATCTGGACAGCCAAGCAGCAGGTGCTCTGTGCCCTGAGCGAGAGCCTGCAGGATGTCCTCAACTACGGCCTGTTCCAGCCGGCCACCTCGGGCCGCGACGCCAACTTCCTGGAGGAGGAGCGACTGCTGCGGGAGTACCCCCAGTCCTTCGAGAAGGGGGTGCCCTACCTGGAGTTCCGATACAAGACCCGAGTTTACAAACAGACCAACCTGGATGAGAAGCAGCTGGCCAAGTTGCACACGAAGACGGGGTTGAAGAAGTTCCTGGAGTACGTGCAGCTCGGGACATCCGATAAGGTGGCACGGCTGCTGGACAAGGGGCTGGACCCCAATTATCATGACTCGGATTCAGGAGAGACCCCCCTGACGCTGGCTGCCCAGACAGAAGGCTCTGTAGAGGTGATTCGAACCCTGTGCCTGGGCGGGGCCCACATCGACTTCCGGGCCCGGGATGGCATGACAGCGCTACACAAGGCCGCGTGTGCCCGTCACTGCCTCGCTCTCACGGCGCTCCTGGATCTTGGGGGTTCCCCCAACTACAAGGACCGCCGGGGGCTGACTCCTCTGTTCCATACGGCTATGGTGGGGGGCGACCCCCGCTGCTGTGAGCTGCTTCTGTACAGCAGGGCCCAGCTGGGCATAGCTGATGAGAACGGCTGGCAGGAGATCCACCAGGCCTGCCAGAGGGGCCATTCTCAGCACCTGGAACACCTGCTCTTCTATGGGGCTGAGCCTGGAGCCCAGAACGCCTCGGGGAACACGGCCCTGCACATCTGCGCCCTCTACAATAAGGAGACGTGTGCTAGGATCCTCCTCTATCGAGGGGCCAACAAGGACGTGAAGAATAACAGCGGACAGACCGCCTTCCAGGTCTGGGGCTGTCGGGGCTGGTTGGGAGGGGGCATGAAGAACACAGAGTGGGTGGCAGTGATTGCTGGGAATTTTGAACTTGGGGAGCTGATCCGAAACCATCGAGAACAGGACGTGGTGCCCTTCCAGGAGTCCCCCAAGTACGCAGCCCGGCGACGGGGACCCCCCGGCGTGGGGCTGACGGTGCCCCCCGCGCTGCTGCGGGCCAACAGTGATACCAGCATGGCCCTGCCTGATTGGATGGTGTTCGCCGCCCCGGGGACCTCGTCCACCGGGGCCCCCGGCCCTACCTCAGGGCCCCAGGGCCAGTCGCAGCCCTCGGCCCCCAGCACCAAGCTCAGCAGTGGGACCCTCCGAAGTGCCAGCAGCCCCCGGGGCGCCCGGGCCCGCTCCCCATCSCGAGGGAGGCACCCCGAGGAGGCGAAGAGGCAGCCCCGTGGACGGCCCAGCTCCAGCGGGACACCCCGGGAAGGGCCAGCTGGGGGCACAGGGGGCTCCGGGGGCCCCGGGGGCTCCCTGGGCAGCCGCGGGAGACGCCGGAAGCTCTACTCAGCGGTCCCCGGACGCTCCTTCATGGCTGTGAAGTCCTACCAGGCCCAAGCCGAGGGGGAGATCTCCCTGAGCAAGGGCGAGAAGATCAAAGTGCTTAGCATCGGGGAAGGAGGCTTCTGGGAAGGCCAGGTCAAAGGTCGCATCGGCTGGTTCCCCTCTGACTGCCTGGAAGAGGTGGCCAACCGCTCCCAGGAGGCAAAGCAAGAAAGCCGAAGTGACAAGGCAAAGAGACTCTTCCGGCATTATACCGTGGGCTCCTACGACAGCTTTGATGCCCCAAGTGATTACATCATCAAGGAGAAGACAGTTCTGCTGCAGAAGAAGGACAGTGAGGGGTTTGGGTTCGTGCTCCGGGGGGCCAAGGCGCAGACCCCCATCGAGGAGTTCACCCCCACCCCGGCCTTCCCGGCGCTGCAGTATCTGGAGTCGGTGGATGAGGGTGGCGTGGCATGGCGAGCCGGACTGCGAATGGGAGACTTCCTCATTGAGGTGAACGGGCAGAATGTGGTGAAGGTCGGCCACCGGCAGGTGGTGAACATGATCCGCCAAGGGGGCAACACGCTGATGGTCAAGGTGGTGATGGTCACCCGGCACCCGGACATGGATGAGGCTCTTCATAAGAAAGCACCGCCGCAGGCTAAGCGGCTCCCGCCCCCAACAATCTCCCTGCGTTCCAAGTCTATGACCTCAGAGCTGGAGGAGATGGAGTACGAGCAGCAAGCTGCGCCGGTGCCCAGCATGGAGAAAAAGCGGACCGTGTATCAGATGGCTCTCAACAAACTGGATGAAATTTTGGCGGCAGCTCAGCAGACCATCAGTGCAAGTGAGAGTCCTGGGCCTGGTGGCCTYGCGTCCCTGGGCAAACACCGACCCAAAGGCTTCTTTGCCACTGAGTCGAGCTTTGATCCCCACCACCGCTCCCAGCCAAGTTATGAACGTCCTTCCTACCTGCCTCCAGGACCTGGGCTCATGCTCCGGCAAAAGTCTATTGGGGCTACAGAAGATGAGAGACCCTACCTAGCACCCCCAGCCATGAAGTTCAGCCGCAGCCTGTCTGTGCCTGGTTCGGAGGACATCCCGCCGCCGCCCACCACGTCCCCACCAGAGCCCCCCTACAGCACACCTCCAGCCCCCTCTTCCTCCGGCCGCCTCACTCCCTCTCCCCGGGGAGCGCCCTTCAACCCCGGCTCAGGTGGCCCCCACCCCGCCTCGTCGCCGTCGTCCTTCGATGGGCCCTGCCCTCCTGACACCCGTGTAGGGAGCCGTGAGAAGAGCTTGTACCACGGCGGGGCCCTGCCCCCTGCGCACCACCCGCCGCCCCCCCACCTGCCGCACGCTCCGCCCCCCCAGCCACACCACCACCACGCCCACCCGCCGCATCCCCCGGAGATGGAGACAGGCGGCTCCCCCGATGACCCCCCTCCCCGACTGGCTCTGGGGCCCCAGCCCAGCCTGCGAGGCTGGCGGGGCGGCGGGCCCAGCGCGACCCCGGGGGCCCTGTCCCCGTCGCACCACGGCAGCGGGGGCGGGGTTAGCGGCTCCTCCCAGGCCCCGGCCCTGCGCTACTTCCAGCTGCCTCCCCGGGCGGCCAGCGCGGCCATGTACGTGCCGGCCCGTTCGGGCCGCGGGCGCAAGGGCCCGCTCGTCAAGCAGACCAAAGTCGAAGGCGAGCCCCAGAAGGGCGGCGGCCTCCCGCCCACGCCCTCGCCCACGTCTCCGGCGTCCCCGCAGCCGCCGCCGGCCGCGGCCGCCCCGTCGGAAAAGAACTCCATCCCCATCCCCACCATCATCATCAAGGCTCCATCCACCAGTAGCAGCGGCCGCAGCAGCCAGGGCAGCAGCACCGAGGCGGAGCCCCCGACCCAGCCCGAGACCGCGGGCGGCGGAGGGGGCGGCGGCGGCGGCGGCGCCTCCGCGCCGAGCCCCGCCCCGGCCATGTCGCCAGTGCCACCGCCCCCCTCGCCCGTGCCCGCCCCCGCCTCGCCCAGCGGCCCGGCCACCCTCGATTTCACCAGCCAGTTCGGAGCGGCCCTGGTCGGGGCGGCTCGGAGAGAAGGGGGCTGGCAGAACGAAGCCCGCCGGCGGTCTACGCTCTTCCTCTCCACCGACACGGGAGACGAGGATGGCGGCGAGAGCTCGCTGGGCCCGGGGGCGCCCCCGGGCCCCCGGCTGCGCCACTCCAAATCCATCGATGAAGGCATGTTTTCGGCCGAGCCCTACCTCCGGCTGGAGTCCGCAGGCGCCGGGAGTGGCGGCGGCTACGGGGGCTACGGAGCCGGCAGCCGAGCCTACGGAAGCAGCGGAGGCAGCAGCGCCTTCACCAGCTTCCTGCCGCCGCGGCCCCTGGTCCACCCGCTGACCGGCAAGGCCCTGGACCCAGCCTCCCCGCTCGGGCTGGCCCTGGCCGCCCGAGAGCGGGCGCTGAAGGAGTCCGCGGAGGGCGCTGGGGCCCCCCAGCCCCCTCCGAGGCCCCCGTCGCCCCGCTACGAGGCTCCGCCGCCCACGCCGCACCACCACTCGCCCCACGCCCACCACGAGCCAGTGCTGCGTCTCTGGGGAGCCCCGCCGCCGGACCCGGCCCGCCGGGAGCTGGGCTACCGGGCCGGGCTGGGCAGCCAGGAGAAGTCCCTTCCGGCCAGCCCGCCAGCTGCCCGACGCTCCCTGCTGCACCGCCTGCCCCCCACCGCCCCCGGGGTCGGGCCCCTCCTGCTGCAGCTGGGGTCCGAGCCCCCCGCCCCGCACCCCGGGGTGAGCAAGGCCTGGAGGTCCGCGGCCCCGGAGGAGCCCGAGCGGCTGCCCCTCCACGTGCGGTTCCTCGAGAACTGCCAGCCTCGGGCCAGTGGGGCGGGGGGAAGGGGCCCCCCCTCGGAGGACGGGCCGGGGATCCCACCGCCCAGCCCACGCCGGTCCGTGCCCGCCTCGCCGACCTCCCCGCGGGGCAGTGACGAGAACGGGCTCCCCCTGCTGGTCCTGCCGCCCCCCGCCCCCTCGGTGGACGTGGAAGACGGTGAATTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGGCCGCCGCCCCTCCCACGCTGGACTCCACCGCATCCAGCCTGACTTCCTATGACAGCGAGGTGGCCACGCTGACCCAGGCGGGCCCCGCAGCTGCTGGGGACGCGCCTCCGCCGGGCCCAGCAGCCCCAGCCGCCCCGCCTGCCCCTGCCCCACAGCCTGGTCCGGACCCTCCAGCTGGCACAGATTCTGGTATCGAGGAGGTGGACAGCCGGAGCAGCAGCGACCACCCGCTGGAGACCATCAGCAGCGCGTCCACGCTGAGCAGCCTGTCTGCCGAAGGCGGGGCTGGGGGCGGGGTGGCCAGTGTGGCCAGTGGGCCGGAGCTTCTGGACACGTATGTGGCCTACCTGGACGGCCAGGCCTTCGGGGGCAGCGGTCCTCCTGGCCCACCATACCCACCGCAGCTCATGACTCCCTCTAAGCTCCGGGGCCGGGCGCTTGGGGCCAGTGGAGGCCTGCGGCCTGGCCCCGGTGGGGGACTCCGAGACCCTGTCACTCCCACCAGCCCCACCGTCTCGGTGACGGGGGCTGGAACCGATGGGCTGCTGGCCCTGAGTGCTTGCTCAGGACCTTCGACGGCAGGTGTGGCCGGCGGTCCAGGGGCTGTAGAGCCAGAAGGCCCACCGGTGCCCTTGCCATCCGCCTCCTCCCTGCCTCGGAAGCTGCTGCCCTGGGAGGAGGGCCCGGGTCCACCGCCACCACCCCTGCCTGGGCCCTTAGCCCAGCCTCAGGCCTCAGCCTTGGCCACAGTAAAAGCCAGCATCATCAGTGAACTCAGCTCCAAGCTTCAGCAGTTTGGGGGCTCCTCGGCAGCTGGTGGCGCTCTGCCCTGGGCCCGGGGAGGCGGCGGGGGAAGCGGGGACGGCCACCACGGGGGAGCCAGCTACGTCCCCGAGAGGACTTCCTCCCTGCAGCGGCAGAGACTCTCTGAAGACTCCCAGTCCTCGCTTCTCTCCAAACCTGTCAGCAGCCTGTTTCAGAACTGGTCCAAACCACCTCTGCCGCCACTCCCCACAGGAACCGGGGTGTCCGCTTCAGCCGCTGCAGCCCCGGGGGCCACCTCGCCGTCGGCCTCCTCCTCCTCCACGTCCGCCCGCCACCTCCAGGGCGTGGAGTTCGAGATGCGGCCACCTTTGCTCCGCCGGGCCCCTAGCCCGTCACTGCTGCCCGCCTCGGAGCACAAGGTCAGCCCTGCACCCCGGCCCTCCTCCCTGCCCATCCTGCCTTCTGGACCCCTCTACCCGGGCCTCTTTGACATCCGCGGCTCCCCCACCGGAGGGGCAGGAGGCTCGGCTGACCCCTTCGCCCCTGTCTTCGTGCCACCGCACCCCGGGATATCCGGGGGGCTCGGTGGGGCCTTGTCAGGGGCCTCCCGCTCCCTCTCACCGACCCGCCTGCTTTCCCTGCCCCCGGACAAGCCGTTCAGCGCTAAACCTCTGGGGTTCTGGACCAAGTTCGACGTGGCTGATTGGCTTGAGTGGCTGGGCTTGGCTGAGCACCGAGCCCGGTTCCTGGACCACGAGATCGATGGCTCCCACCTGCCCGCCTTGACCAAGGAGGACTACGTCGATCTGGGGGTGACCAGGGTGGGCCACCGCATGAACATCGACCGGGCTCTCAAATTTTTCCTGGAGAGGTGA

Related Sequences

bmy_14016T0 Protein

Length: 2177 aa      View alignments
>bmy_14016T0
MMTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGGPGSLASVRGLQGRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYSRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCARILLYRGANKDVKNNSGQTAFQVWGCRGWLGGGMKNTEWVAVIAGNFELGELIRNHREQDVVPFQESPKYAARRRGPPGVGLTVPPALLRANSDTSMALPDWMVFAAPGTSSTGAPGPTSGPQGQSQPSAPSTKLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRIGWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEALHKKAPPQAKRLPPPTISLRSKSMTSELEEMEYEQQAAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGATEDERPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGAPFNPGSGGPHPASSPSSFDGPCPPDTRVGSREKSLYHGGALPPAHHPPPPHLPHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSATPGALSPSHHGSGGGVSGSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPTPSPTSPASPQPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPETAGGGGGGGGGGASAPSPAPAMSPVPPPPSPVPAPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDTGDEDGGESSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGGGYGGYGAGSRAYGSSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESAEGAGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGAPPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGSEPPAPHPGVSKAWRSAAPEEPERLPLHVRFLENCQPRASGAGGRGPPSEDGPGIPPPSPRRSVPASPTSPRGSDENGLPLLVLPPPAPSVDVEDGEFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPPTLDSTASSLTSYDSEVATLTQAGPAAAGDAPPPGPAAPAAPPAPAPQPGPDPPAGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGAGGGVASVASGPELLDTYVAYLDGQAFGGSGPPGPPYPPQLMTPSKLRGRALGASGGLRPGPGGGLRDPVTPTSPTVSVTGAGTDGLLALSACSGPSTAGVAGGPGAVEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGGGGSGDGHHGGASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTGVSASAAAAPGATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFSAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER*