Part of scaffold_951 (Scaffold)

For more information consult the page for scaffold_951 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPS6 ENSTTRG00000012312 (Bottlenosed dolphin)

Gene Details

COP9 signalosome subunit 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011678, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.28%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0704)

COPS6 ENSBTAG00000002871 (Cow)

Gene Details

COP9 signalosome complex subunit 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003725, Cow)

Protein Percentage 99.07%
cDNA percentage 95.68%
Ka/Ks Ratio 0.02786 (Ka = 0.0055, Ks = 0.1967)

COPS6  (Minke Whale)

Gene Details

COP9 signalosome subunit 6

External Links

Gene match (Identifier: BACU012095, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.46%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:46878..44201   Strand:-
>bmy_13978
ATGGCGGCGGCGGCGGCGGCAGCGGCGGCGCCTGCGGCGAACGGGACCGGAGGGAGCAGCGGGATGGAGGTGGATGCAGCAGTCGTGCCCAGCGTGATGGCCTCCGGAGTGACTGGCAGCGTTTCAGTCGCTCTTCATCCCCTCGTCATTCTCAACATCTCAGATCACTGGATTCGCATGCGCTCGCAGGAGGGGCGGCCTATGCAGGTGATTGGGGCTCTGATCGGGAAGCAGGAGGGCCGAAATATCGAGGTGATGAACTCCTTTGAGCTGCTGTCCCACACCGTGGAAGAGAAGATTATCATTGACAAGGAATATTATTACACCAAGGAGGAGCAGTTTAAACAGGTATTCAAGGAGCTGGAGTTCCTCGGTTGGTACACCACAGGGGGGCCGCCTGACCCCTCCGACATCCACGTCCATAAGCAGGTGTGCGAGATAATTGAGAGCCCTCTGTTTCTTAAGTTGAACCCTATGACCAAGCACACAGATCTTCCCGTCAGCGTTTTTGAGTCTGTCATAGATATAATCAATGGAGAGGCCACAATGCTGTTTGCTGAGCTGACTTACACTCTGGCCACAGAGGAAGCTGAACGCATTGGTGTGGACCACGTGGCGCGAATGACAGCAACAGGCAGTGGAGAGAACTCCACTGTGGCCGAACACCTGATCGCACAGCACAGCGCCATCAAGATGCTGCACAGCCGCGTCAAGCTCATCTTGGAGTACGTCAAGGCCTCCGAAGCAGGAGAGGTCCCCTTTAACCATGAGATCCTGCGCGAGGCCTATGCTCTGTGTCATTGCCTCCCAGTGCTCAGCACAGACAAGTTCAAGACGGACTTTTACGATCAATGCAATGACGTGGGGCTCATGGCCTACCTTGGCACCATCACCAAGACATGCAACACCATGAACCAGTTCGTGAACAAGTTCAACGTCCTCTATGACCGACAAGGCATTGGCAGGCGGATGCGGGGGCTCTTCTTCTGA

Related Sequences

bmy_13978T0 Protein

Length: 330 aa      View alignments
>bmy_13978T0
MAAAAAAAAAPAANGTGGSSGMEVDAAVVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF*